WormBase Tree Display for Variation: WBVar02087453
expand all nodes | collapse all nodes | view schema
WBVar02087453 | Name | Public_name | WBVar02087453 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00817235 | |||||||
Y38E10A.21c.1:c.118+2562_118+2581delinsGTAAAAATGG | ||||||||
Y38E10A.21d.1:c.323-3768_323-3749delinsGTAAAAATGG | ||||||||
HGVSg | CHROMOSOME_II:g.12665459_12665478delinsGTAAAAATGG | |||||||
Sequence_details | SMap | S_parent | Sequence | Y38E10A | ||||
Flanking_sequences | AGAGTATTCGGGAAACTGAAAAAAAAAATT | AAATATTATGAACATTTCCAAAAAATGTCT | ||||||
Mapping_target | Y38E10A | |||||||
Source_location | 225 | CHROMOSOME_II | 12665393 | 12665412 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GTAAAAATGG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004347 | ||||||
Transcript | Y38E10A.21d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y38E10A.21d.1:c.323-3768_323-3749delinsGTAAAAATGG | |||||||
Intron_number | 4/8 | |||||||
Y38E10A.21c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y38E10A.21c.1:c.118+2562_118+2581delinsGTAAAAATGG | |||||||
Intron_number | 2/7 | |||||||
Method | WGS_Flibotte |