WormBase Tree Display for Variation: WBVar02089912
expand all nodes | collapse all nodes | view schema
WBVar02089912 | Name | Public_name | WBVar02089912 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00819778 | |||||||
Y94H6A.5a.1:c.1194_1195+13delinsAGGTGAAAACTCC | ||||||||
HGVSg | CHROMOSOME_IV:g.2697305_2697319delinsGGAGTTTTCACCT | |||||||
Sequence_details | SMap | S_parent | Sequence | Y94H6A | ||||
Flanking_sequences | AATCAATCTTCTGAAAAATTCCAATTTTTT | TTATATTCGCTCTTATCACTGGCAAAATTG | ||||||
Mapping_target | Y94H6A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2697303 | 2697317 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GGAGTTTTCACCT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022378 | ||||||
Transcript | Y94H6A.5a.1 | VEP_consequence | splice_donor_variant,coding_sequence_variant,intron_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y94H6A.5a.1:c.1194_1195+13delinsAGGTGAAAACTCC | |||||||
cDNA_position | 1201-? | |||||||
CDS_position | 1194-? | |||||||
Protein_position | 398-? | |||||||
Intron_number | 9/16 | |||||||
Exon_number | 9/17 | |||||||
Method | WGS_Flibotte |