WormBase Tree Display for Variation: WBVar02091410
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WBVar02091410 | Name | Public_name | WBVar02091410 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00821307 | |||||||
CE28858:p.ProAlaLysArg72= | ||||||||
Y59A8B.6.1:c.216_223delinsGGCCAAAA | ||||||||
HGVSg | CHROMOSOME_V:g.18023955_18023962delinsGGCCAAAA | |||||||
Sequence_details | SMap | S_parent | Sequence | Y59A8B | ||||
Flanking_sequences | ACAAGGAGCTTCATCGTCATCAGCTCCACC | GAGCCCGGGATGATGATGGAGATGGAGAAG | ||||||
Mapping_target | Y59A8B | |||||||
Source_location | 225 | CHROMOSOME_V | 18023927 | 18023934 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GGCCAAAA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (15) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013343 | ||||||
Transcript | Y59A8B.6.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y59A8B.6.1:c.216_223delinsGGCCAAAA | |||||||
HGVSp | CE28858:p.ProAlaLysArg72= | |||||||
cDNA_position | 223-231 | |||||||
CDS_position | 215-223 | |||||||
Protein_position | 72-75 | |||||||
Exon_number | 3/15 | |||||||
Codon_change | cCAGCAAAGCga/cCGGCCAAAAga | |||||||
Amino_acid_change | PAKR | |||||||
Method | WGS_Flibotte |