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WormBase Tree Display for Variation: WBVar02103518

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Name Class

WBVar02103518NamePublic_nameWBVar02103518
Other_namecewivar00833827
Y54G2A.17a.2:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT
Y54G2A.17a.1:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT
Y54G2A.17a.3:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT
HGVSgCHROMOSOME_IV:g.2872090_2872118delinsACGGGAAAAATGCTCCGGAATTTCGGAGTGTG
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesAGTTTTGACGCATATTTAAAGCTAAAAAAATCGTTGTACACAATAAAATTAAAATAAATT
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28720882872116From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionACGGGAAAAATGCTCCGGAATTTCGGAGTGTG
Deletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021882
TranscriptY54G2A.17a.3VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.3:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT
cDNA_position1780-1808
Exon_number8/8
Y54G2A.17a.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.2:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT
cDNA_position1876-1904
Exon_number9/9
Y54G2A.17a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT
cDNA_position1825-1853
Exon_number9/9
MethodWGS_Flibotte