WormBase Tree Display for Variation: WBVar02103518
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WBVar02103518 | Name | Public_name | WBVar02103518 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00833827 | |||||||
Y54G2A.17a.2:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT | ||||||||
Y54G2A.17a.1:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT | ||||||||
Y54G2A.17a.3:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT | ||||||||
HGVSg | CHROMOSOME_IV:g.2872090_2872118delinsACGGGAAAAATGCTCCGGAATTTCGGAGTGTG | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | ||||
Flanking_sequences | AGTTTTGACGCATATTTAAAGCTAAAAAAA | TCGTTGTACACAATAAAATTAAAATAAATT | ||||||
Mapping_target | Y54G2A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2872088 | 2872116 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | ACGGGAAAAATGCTCCGGAATTTCGGAGTGTG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021882 | ||||||
Transcript | Y54G2A.17a.3 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.3:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT | |||||||
cDNA_position | 1780-1808 | |||||||
Exon_number | 8/8 | |||||||
Y54G2A.17a.2 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.2:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT | |||||||
cDNA_position | 1876-1904 | |||||||
Exon_number | 9/9 | |||||||
Y54G2A.17a.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54G2A.17a.1:c.*106_*134delinsCACACTCCGAAATTCCGGAGCATTTTTCCCGT | |||||||
cDNA_position | 1825-1853 | |||||||
Exon_number | 9/9 | |||||||
Method | WGS_Flibotte |