WormBase Tree Display for Variation: WBVar02108880
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WBVar02108880 | Name | Public_name | WBVar02108880 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00839373 | |||||||
ZC47.5.1:c.391_412delinsCACGTCCTGAAGCAGGATGTGG | ||||||||
CE15004:p.Asn131_Asn138delinsHisValLeuLysGlnAspValAsp | ||||||||
HGVSg | CHROMOSOME_III:g.1270201_1270222delinsCCACATCCTGCTTCAGGACGTG | |||||||
Sequence_details | SMap | S_parent | Sequence | ZC47 | ||||
Flanking_sequences | GATTCAGCGTGATAGTGTCCACGTGGATAT | TACAAGAAAGTTGACAGTGTTGTGCCTGTA | ||||||
Mapping_target | ZC47 | |||||||
Source_location | 225 | CHROMOSOME_III | 1270193 | 1270214 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | CCACATCCTGCTTCAGGACGTG | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013838 | ||||||
Transcript | ZC47.5.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | ZC47.5.1:c.391_412delinsCACGTCCTGAAGCAGGATGTGG | |||||||
HGVSp | CE15004:p.Asn131_Asn138delinsHisValLeuLysGlnAspValAsp | |||||||
cDNA_position | 434-456 | |||||||
CDS_position | 391-413 | |||||||
Protein_position | 131-138 | |||||||
Exon_number | 3/5 | |||||||
Codon_change | AACGTTCTGAAAGAGGAAGTGAAt/CACGTCCTGAAGCAGGATGTGGAt | |||||||
Amino_acid_change | NVLKEEVN/HVLKQDVD | |||||||
Method | WGS_Flibotte |