WormBase Tree Display for Variation: WBVar02109039
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WBVar02109039 | Name | Public_name | WBVar02109039 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00839534 | |||||||
Y94H6A.9a.1:c.377+993_378-955delinsAAAAGAATTGATTTTCTAGCGATTTAGCCGCCGC | ||||||||
Y94H6A.9b.1:c.53+993_54-955delinsAAAAGAATTGATTTTCTAGCGATTTAGCCGCCGC | ||||||||
Y94H6A.9d.1:c.377+993_378-955delinsAAAAGAATTGATTTTCTAGCGATTTAGCCGCCGC | ||||||||
HGVSg | CHROMOSOME_IV:g.2724148_2724247delinsGCGGCGGCTAAATCGCTAGAAAATCAATTCTTTT | |||||||
Sequence_details | SMap | S_parent | Sequence | Y94H6A | ||||
Flanking_sequences | CGATTTTTATGTGTAAAAATTGATATTAAA | TTTTTGGAGAAAAATTGGAAATTTCATGGT | ||||||
Mapping_target | Y94H6A | |||||||
Source_location | 225 | CHROMOSOME_IV | 2724146 | 2724245 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | GCGGCGGCTAAATCGCTAGAAAATCAATTCTTTT | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022381 | ||||||
Transcript | Y94H6A.9a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y94H6A.9a.1:c.377+993_378-955delinsAAAAGAATTGATTTTCTAGCGATTTAGCCGCCGC | |||||||
Intron_number | 4/7 | |||||||
Y94H6A.9b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y94H6A.9b.1:c.53+993_54-955delinsAAAAGAATTGATTTTCTAGCGATTTAGCCGCCGC | |||||||
Intron_number | 1/3 | |||||||
Y94H6A.9d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y94H6A.9d.1:c.377+993_378-955delinsAAAAGAATTGATTTTCTAGCGATTTAGCCGCCGC | |||||||
Intron_number | 4/4 | |||||||
Method | WGS_Flibotte |