WormBase Tree Display for Variation: WBVar02115048
expand all nodes | collapse all nodes | view schema
WBVar02115048 | Name | Public_name | WBVar02115048 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00845753 | |||||||
M02B1.1c.1:c.485-92_485-59delinsAAAAACAAAACAAAAATACATTCAAACAAAGAAGAAAATGA | ||||||||
M02B1.1b.1:c.737-92_737-59delinsAAAAACAAAACAAAAATACATTCAAACAAAGAAGAAAATGA | ||||||||
M02B1.1a.1:c.857-92_857-59delinsAAAAACAAAACAAAAATACATTCAAACAAAGAAGAAAATGA | ||||||||
HGVSg | CHROMOSOME_IV:g.12853472_12853505delinsAAAAACAAAACAAAAATACATTCAAACAAAGAAGAAAATGA | |||||||
Sequence_details | SMap | S_parent | Sequence | ZK896 | ||||
Flanking_sequences | CTAGAGACATCCGCTACAAAAATCGAGAAA | AAAAAAAAACCGATAGAAATCGCACGTTCT | ||||||
Mapping_target | ZK896 | |||||||
Source_location | 225 | CHROMOSOME_IV | 12853448 | 12853481 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | AAAAACAAAACAAAAATACATTCAAACAAAGAAGAAAATGA | ||||||
Deletion | ||||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00005153 | ||||||
Transcript | M02B1.1b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | M02B1.1b.1:c.737-92_737-59delinsAAAAACAAAACAAAAATACATTCAAACAAAGAAGAAAATGA | |||||||
Intron_number | 5/5 | |||||||
M02B1.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | M02B1.1a.1:c.857-92_857-59delinsAAAAACAAAACAAAAATACATTCAAACAAAGAAGAAAATGA | |||||||
Intron_number | 7/8 | |||||||
M02B1.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | M02B1.1c.1:c.485-92_485-59delinsAAAAACAAAACAAAAATACATTCAAACAAAGAAGAAAATGA | |||||||
Intron_number | 3/3 | |||||||
Method | WGS_Flibotte |