WormBase Tree Display for Variation: WBVar02123328

WBVar02123328 Name: Public_name: WBVar02123328
    Other_name: cewivar00854251
    HGVSg: CHROMOSOME_X:g.3073011_3083010del
  Sequence_details: SMap: S_parent: Sequence: F52E4
    Flanking_sequences: CGATAACCGCGCCTCCGGCGCGGCCAACGA AACTACAACTATGAAGACATTAACTGAGCG
    Mapping_target: F52E4
    Source_location: 225 CHROMOSOME_X 3073001 3083000 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00006670
      WBGene00197203
      WBGene00197807
    Transcript: F52E4.4.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2-4/13
        Exon_number: 1-4/14
      F52E4.10 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      F52E4.11 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
  Remark: The boundaries of this variant have been identified only approximately
    This allele is a copy number variation determined from whole-genome sequence data, and should be assumed to be non-homozygous
  Method: WGS_Flibotte