WormBase Tree Display for Variation: WBVar02125047

WBVar02125047 Evidence: Paper_evidence: WBPaper00042520
  Name: Public_name: cas64
    Other_name: F43C9.4a.2:c.400_541+2del
      F43C9.4a.1:c.400_541+2del
      F43C9.4b.1:c.382_523+2del
    HGVSg: CHROMOSOME_X:g.4798490_4798633del
  Sequence_details: SMap: S_parent: Sequence: F43C9
    Flanking_sequences: tcaagtggatgtacttgggtaattgcagga aagttcacataagaatgattaaaaactatt
    Mapping_target: F43C9
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: GOU
    Status: Live
  Affects: Gene: WBGene00003245
    Transcript: F43C9.4b.1 VEP_consequence: splice_donor_variant,coding_sequence_variant
        VEP_impact: HIGH
        HGVSc: F43C9.4b.1:c.382_523+2del
        cDNA_position: 382-?
        CDS_position: 382-?
        Protein_position: 128-?
        Intron_number: 3/6
        Exon_number: 3/7
      F43C9.4a.2 VEP_consequence: splice_donor_variant,coding_sequence_variant
        VEP_impact: HIGH
        HGVSc: F43C9.4a.2:c.400_541+2del
        cDNA_position: 496-?
        CDS_position: 400-?
        Protein_position: 134-?
        Intron_number: 6/10
        Exon_number: 6/11
      F43C9.4a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant
        VEP_impact: HIGH
        HGVSc: F43C9.4a.1:c.400_541+2del
        cDNA_position: 403-?
        CDS_position: 400-?
        Protein_position: 134-?
        Intron_number: 5/9
        Exon_number: 5/10
  Genetics: Interpolated_map_position: X -6.23651
  Reference: WBPaper00042520
  Method: Deletion_allele