WormBase Tree Display for Variation: WBVar02125160

WBVar02125160 Name: Public_name: tm6517
    Other_name: Y71F9AL.14.1:c.118-46_451+175delinsGAAAAATCGAAAAAAA
      Y71F9AL.14.2:c.118-46_451+175delinsGAAAAATCGAAAAAAA
    HGVSg: CHROMOSOME_I:g.2881853_2882407delinsTTTTTTTCGATTTTTC
  Sequence_details: SMap: S_parent: Sequence: Y71F9AL
    Flanking_sequences: caatttttccagttttttcgatttttccta ctatttatttttggcagattgccggtgtac
    Mapping_target: Y71F9AL
    Source_location: 7 CHROMOSOME_I 2881852 2882408 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: TTTTTTTCGATTTTTC
      Deletion
    PCR_product: tm6517_external
      tm6517_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6517
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00022118
    Transcript: Y71F9AL.14.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y71F9AL.14.1:c.118-46_451+175delinsGAAAAATCGAAAAAAA
        Intron_number: 2-3/4
        Exon_number: 3/5
      Y71F9AL.14.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y71F9AL.14.2:c.118-46_451+175delinsGAAAAATCGAAAAAAA
        Intron_number: 1-2/3
        Exon_number: 2/4
  Isolation: Mutagen: TMP/UV
  Genetics: Map: I
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 21892/21893-TTTTTTTCGATTTTTC-22447/22448 (555 bp deletion + 16 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele