WormBase Tree Display for Variation: WBVar02125189

WBVar02125189 Name: Public_name: tm6547
    Other_name: W03A5.7.2:c.194-120_521+110delinsAT
      W03A5.7.1:c.194-120_521+110delinsAT
    HGVSg: CHROMOSOME_III:g.5417149_5417706delinsAT
  Sequence_details: SMap: S_parent: Sequence: W03A5
    Flanking_sequences: tcggtgtctgtcctacagtctatgcaacca tttagaatactgccggcaattttcaaaata
    Mapping_target: W03A5
    Source_location: 7 CHROMOSOME_III 5417148 5417707 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: AT
      Deletion
    PCR_product: tm6547_external
      tm6547_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6547
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00001042
    Transcript: W03A5.7.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: W03A5.7.1:c.194-120_521+110delinsAT
        Intron_number: 2-3/5
        Exon_number: 3/6
      W03A5.7.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: W03A5.7.2:c.194-120_521+110delinsAT
        Intron_number: 3-4/6
        Exon_number: 4/7
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 12316/12317-AT-12874/12875 (558 bp deletion + 2 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele