WormBase Tree Display for Variation: WBVar02125254

WBVar02125254 Name: Public_name: tm6590
    Other_name: C54G10.2a.2:c.976+6_1328del
      C54G10.2a.1:c.976+6_1328del
    HGVSg: CHROMOSOME_V:g.14644164_14644612del
  Sequence_details: SMap: S_parent: Sequence: C54G10
    Flanking_sequences: tcattacaaatgcaaataattggaatttta cttacgcttcttaatttttgccccttcgcc
    Mapping_target: C54G10
    Source_location: 7 CHROMOSOME_V 14644163 14644613 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm6590_external
      tm6590_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6590
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00004337
    Transcript: C54G10.2a.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C54G10.2a.2:c.976+6_1328del
        cDNA_position: ?-1390
        CDS_position: ?-1328
        Protein_position: ?-443
        Intron_number: 5-6/9
        Exon_number: 6-7/10
      C54G10.2a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C54G10.2a.1:c.976+6_1328del
        cDNA_position: ?-1512
        CDS_position: ?-1328
        Protein_position: ?-443
        Intron_number: 6-7/10
        Exon_number: 7-8/11
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 3944/3945-4393/4394 (449 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele