WormBase Tree Display for Variation: WBVar02125509

WBVar02125509 Name: Public_name: tm6654
    Other_name: Y38A8.3b.1:c.175-6_851del
      Y38A8.3a.1:c.175-6_851del
    HGVSg: CHROMOSOME_II:g.4958724_4959551del
  Sequence_details: SMap: S_parent: Sequence: Y38A8
    Flanking_sequences: gattttctttcaacttacctcttctttgca atgacaatataaaatataagtaacaaatta
    Mapping_target: Y38A8
    Source_location: 7 CHROMOSOME_II 4958723 4959552 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm6654_external
      tm6654_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6654
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00006737
    Transcript: Y38A8.3b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y38A8.3b.1:c.175-6_851del
        cDNA_position: ?-910
        CDS_position: ?-851
        Protein_position: ?-284
        Intron_number: 3-6/13
        Exon_number: 4-7/14
      Y38A8.3a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y38A8.3a.1:c.175-6_851del
        cDNA_position: ?-876
        CDS_position: ?-851
        Protein_position: ?-284
        Intron_number: 3-6/16
        Exon_number: 4-7/17
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal of sterile by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal of sterile by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 8919/8920-9747/9748 (828 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele