WormBase Tree Display for Variation: WBVar02125529

WBVar02125529 Name: Public_name: tm6657
    Other_name: F28C6.8b.1:c.375+93_*49del
      F28C6.8a.1:c.258+93_*49del
    HGVSg: CHROMOSOME_II:g.8607316_8607692del
  Sequence_details: SMap: S_parent: Sequence: F28C6
    Flanking_sequences: aaattattcagtttatgatgtcatggttgt tattttatttatatggcactggcgtctgtt
    Mapping_target: F28C6
    Source_location: 7 CHROMOSOME_II 8607315 8607693 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm6657_external
      tm6657_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6657
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00009207
    Transcript: F28C6.8b.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F28C6.8b.1:c.375+93_*49del
        cDNA_position: ?-619
        Intron_number: 1/2
        Exon_number: 2-3/3
      F28C6.8a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F28C6.8a.1:c.258+93_*49del
        cDNA_position: ?-502
        Intron_number: 1/2
        Exon_number: 2-3/3
  Isolation: Mutagen: TMP/UV
  Genetics: Map: II
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal or sterile by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
            Laboratory_evidence: FX
  Remark: 18458/18459-18835/18836 (377 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele