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WormBase Tree Display for Variation: WBVar02125548

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Name Class

WBVar02125548NamePublic_nametm6700
Other_nameZC168.3a.1:c.144+29_1036-29del
HGVSgCHROMOSOME_IV:g.10733233_10734406del
Sequence_detailsSMapS_parentSequenceZC168
Flanking_sequencesatctggaacctttggatgagaaatttttcttttgaaattgaagttgtaaaacacgaaccc
Mapping_targetZC168
Source_location7CHROMOSOME_IV1073323210734407Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm6700_external
tm6700_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq6700
NBP_allele
StatusLive
AffectsGeneWBGene00013857
TranscriptZC168.3a.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScZC168.3a.1:c.144+29_1036-29del
Intron_number2-7/9
Exon_number3-7/10
IsolationMutagenTMP/UV
GeneticsMapIV
DescriptionPhenotypeWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal or sterile by the National BioResource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Laboratory_evidenceFX
WBPhenotype:0000688Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal or sterile by the National BioResource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Laboratory_evidenceFX
Remark14433/14434-15607/15608 (1174 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele