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WormBase Tree Display for Variation: WBVar02125554

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Name Class

WBVar02125554NamePublic_nametm6704
Other_nameZK484.4.1:c.699_950+217del
HGVSgCHROMOSOME_I:g.6074546_6075410del
Sequence_detailsSMapS_parentSequenceZK484
Flanking_sequencestttaaaacattaggaaaaatcgcctaaaaaagcttctggaaattgggaatattacatttg
Mapping_targetZK484
Source_location7CHROMOSOME_I60745456075411Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm6704_external
tm6704_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq6704
NBP_allele
StatusLive
AffectsGeneWBGene00022750
TranscriptZK484.4.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScZK484.4.1:c.699_950+217del
cDNA_position748-?
CDS_position699-?
Protein_position233-?
Intron_number7-8/16
Exon_number7-8/17
IsolationMutagenTMP/UV
GeneticsMapI
DescriptionPhenotypeWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal or sterile by the National BioResource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Laboratory_evidenceFX
WBPhenotype:0000688Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal or sterile by the National BioResource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Laboratory_evidenceFX
Remark8494/8495-9359/9360 (865 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele