WormBase Tree Display for Variation: WBVar02133500

WBVar02133500 Evidence: Paper_evidence: WBPaper00045317
  Name: Public_name: h9637
    Other_name: Y54G2A.65:n.86C>T
      Y54G2A.10a.1:c.127-125G>A
      Y54G2A.10b.1:c.-374G>A
    HGVSg: CHROMOSOME_IV:g.2800096G>A
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: AAATATTTACTCTACGCCATTAGGAACAGCTGTATACAGC TGTCCTCGGTAGTATAGTGGTGAGTATCCGCGTCTGTCACATGCGAGGCCCGGGTTCAATTCCCGGCCGGGGAGAATCGT
    Mapping_target: CHROMOSOME_IV
    Source_location: 200 CHROMOSOME_IV 2800093 2800093
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023724
    Laboratory: KR
    Analysis: WGS_Rose
    Status: Live
  Affects: Gene: WBGene00199591
      WBGene00021875
    Transcript: Y54G2A.10a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.10a.1:c.127-125G>A
        Intron_number: 2/5
      Y54G2A.65 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.65:n.86C>T
        cDNA_position: 86
        Exon_number: 1/1
      Y54G2A.10b.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y54G2A.10b.1:c.-374G>A
        cDNA_position: 391
        Exon_number: 1/5
  Reference: WBPaper00040589
    WBPaper00000975
    WBPaper00003985
    WBPaper00000699
    WBPaper00045317
  Method: WGS_Rose