WormBase Tree Display for Variation: WBVar02140646
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| WBVar02140646 | Evidence | Paper_evidence | WBPaper00045317 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | h8053 | ||||
| Other_name | R07D5.1g.1:c.70-781C>T | |||||
| R07D5.1d.1:c.319-781C>T | ||||||
| R07D5.1i.1:c.109-781C>T | ||||||
| R07D5.1j.1:c.247-781C>T | ||||||
| R07D5.1c.1:c.-114-781C>T | ||||||
| R07D5.1e.1:c.319-781C>T | ||||||
| R07D5.1a.2:c.247-781C>T | ||||||
| R07D5.1a.1:c.247-781C>T | ||||||
| R07D5.1h.1:c.109-781C>T | ||||||
| R07D5.1f.1:c.70-781C>T | ||||||
| HGVSg | CHROMOSOME_X:g.15125968G>A | |||||
| Sequence_details | SMap | S_parent | Sequence | R07D5 | ||
| Flanking_sequences | AAAGCTGAAGAGGTTTCAAAATAACAAATGACCCTAACTA | ATCTTAACAAAAAACTTTTGTAAAAAATAAGAAAGAAAAT | ||||
| Mapping_target | CHROMOSOME_X | |||||
| Source_location | 200 | CHROMOSOME_X | 15125888 | 15125888 | ||
| Type_of_mutation | Substitution | G | A | |||
| SeqStatus | Sequenced | |||||
| Variation_type | Allele | |||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00023680 | |||||
| Laboratory | KR | |||||
| Analysis | WGS_Rose | |||||
| Status | Live | |||||
| Affects | Gene | WBGene00006747 | ||||
| Transcript | R07D5.1i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | R07D5.1i.1:c.109-781C>T | |||||
| Intron_number | 3/11 | |||||
| R07D5.1a.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | R07D5.1a.2:c.247-781C>T | |||||
| Intron_number | 3/11 | |||||
| R07D5.1f.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | R07D5.1f.1:c.70-781C>T | |||||
| Intron_number | 2/9 | |||||
| R07D5.1h.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | R07D5.1h.1:c.109-781C>T | |||||
| Intron_number | 2/9 | |||||
| R07D5.1c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | R07D5.1c.1:c.-114-781C>T | |||||
| Intron_number | 2/11 | |||||
| R07D5.1a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | R07D5.1a.1:c.247-781C>T | |||||
| Intron_number | 4/12 | |||||
| R07D5.1g.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | R07D5.1g.1:c.70-781C>T | |||||
| Intron_number | 3/11 | |||||
| R07D5.1d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | R07D5.1d.1:c.319-781C>T | |||||
| Intron_number | 2/9 | |||||
| R07D5.1e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | R07D5.1e.1:c.319-781C>T | |||||
| Intron_number | 2/10 | |||||
| R07D5.1j.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | R07D5.1j.1:c.247-781C>T | |||||
| Intron_number | 2/9 | |||||
| Reference | WBPaper00040589 | |||||
| WBPaper00000975 | ||||||
| WBPaper00003985 | ||||||
| WBPaper00000699 | ||||||
| WBPaper00045317 | ||||||
| Method | WGS_Rose |
