WormBase Tree Display for Variation: WBVar02141111

WBVar02141111 Name: Public_name: tm6826
    Other_name: B0035.12.2:c.-93_1193delinsCACTTTTGCA
    HGVSg: CHROMOSOME_IV:g.11331287_11332964delinsTGCAAAAGTG
  Sequence_details: SMap: S_parent: Sequence: B0035
    Flanking_sequences: atttgtcgataatctgctgtagtatcccaa tgcaaaagtgcgatagagcgcgaaagaaac
    Mapping_target: B0035
    Source_location: 7 CHROMOSOME_IV 11331286 11332965 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: TGCAAAAGTG
      Deletion
    PCR_product: tm6826_external
      tm6826_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6826
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00007111
    Transcript: B0035.12.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,start_lost,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: B0035.12.2:c.-93_1193delinsCACTTTTGCA
        cDNA_position: 6-1291
        CDS_position: ?-1193
        Protein_position: ?-398
        Intron_number: 2-7/13
        Exon_number: 1-8/14
      B0035.12.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-1214
        CDS_position: ?-1193
        Protein_position: ?-398
        Intron_number: 2-7/12
        Exon_number: 1-8/13
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 36997/36998-TGCAAAAGTG-38675/38676 (1678bp deletion + 10 bp insertion)
    This knockout was generated by the National BioResource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. PMID 23173093 Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele