WormBase Tree Display for Variation: WBVar02141138

WBVar02141138 Name: Public_name: tm6857
    HGVSg: CHROMOSOME_V:g.7493_7844del
  Sequence_details: SMap: S_parent: Sequence: B0348
    Flanking_sequences: accttgaacgttgttgacgtcctcccacat attagagctcggaaaacgataaaatagaga
    Mapping_target: B0348
    Source_location: 7 CHROMOSOME_V 7492 7848 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Insertion: ACG
      Deletion
    PCR_product: tm6857_external
      tm6857_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6857
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00002061
    Transcript: B0348.6c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-295
        CDS_position: ?-285
        Protein_position: ?-95
        Intron_number: 2/5
        Exon_number: 1-3/6
      B0348.6a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-289
        CDS_position: ?-285
        Protein_position: ?-95
        Intron_number: 2/5
        Exon_number: 1-3/6
      B0348.6b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-291
        CDS_position: ?-285
        Protein_position: ?-95
        Intron_number: 2/5
        Exon_number: 1-3/6
  Isolation: Mutagen: TMP/UV
  Genetics: Map: V
  Description: Phenotype: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0000688 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as lethal OR sterile by the National Bioresource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 2463/2464-ACG-2818/2819 (355 bp deletion + 3 bp insertion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele