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WormBase Tree Display for Variation: WBVar02141142

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Name Class

WBVar02141142NamePublic_nametm6861
Other_nameF14B4.3.1:c.2463_2780+170del
HGVSgCHROMOSOME_I:g.9282524_9283011del
Sequence_detailsSMapS_parentSequenceF14B4
Flanking_sequencesgcccaaaaatcgatacttccacaagaatgtgccggttcagcgtaatggaatttatgagtt
Mapping_targetF14B4
Source_location7CHROMOSOME_I92825239283012Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm6861_external
tm6861_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq6861
NBP_allele
StatusLive
AffectsGeneWBGene00008781
TranscriptF14B4.3.1VEP_consequencesplice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScF14B4.3.1:c.2463_2780+170del
cDNA_position2477-?
CDS_position2463-?
Protein_position821-?
Intron_number8/11
Exon_number8/12
IsolationMutagenTMP/UV
GeneticsMapI
DescriptionPhenotypeWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
WBPhenotype:0000688Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as lethal OR sterile by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
Remark16121/16122-16609/16610 (488 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele