WormBase Tree Display for Variation: WBVar02144070

WBVar02144070 Name: Public_name: tm7372
    Other_name: Y54G2A.25a.1:c.2456-2_3236-221del
    HGVSg: CHROMOSOME_IV:g.2965721_2967777del
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: tttttttaattttggcggaaaattcaaatt gaaatttgacataaaccagaaaaaaacagg
    Mapping_target: Y54G2A
    Source_location: 7 CHROMOSOME_IV 2965720 2967778 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm7372_external
      tm7372_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 7372
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00002243
    Transcript: Y54G2A.25a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y54G2A.25a.1:c.2456-2_3236-221del
        Intron_number: 16-21/23
        Exon_number: 17-21/24
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 215499/215500-217556/217557 (2057 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele