WormBase Tree Display for Variation: WBVar02144094

WBVar02144094 Name: Public_name: tm7101
    Other_name: K10B3.9.2:c.-13-147_211-117del
    HGVSg: CHROMOSOME_X:g.3115170_3115725del
  Sequence_details: SMap: S_parent: Sequence: K10B3
    Flanking_sequences: tatgctcgctagtcgcccgtctctctaaca agtttgtagcacgtaaagtaatcttgagtg
    Mapping_target: K10B3
    Source_location: 7 CHROMOSOME_X 3115169 3115726 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm7101_external
      tm7101_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 7101
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00003124
    Transcript: K10B3.9.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: K10B3.9.2:c.-13-147_211-117del
        Intron_number: 1-3/4
        Exon_number: 2-3/5
      K10B3.9.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2/3
        Exon_number: 1-2/4
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 11795/11796-12351/12352 (556 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele