WormBase Tree Display for Variation: WBVar02147079

WBVar02147079 Name: Public_name: tm8894
    HGVSg: CHROMOSOME_IV:g.2711678_2712425del
  Sequence_details: SMap: S_parent: Sequence: Y94H6A
    Flanking_sequences: aaaatcagaaaacggagtataattattgaa tttactgttttttaacaaacaaattggtgg
    Mapping_target: Y94H6A
    Source_location: 7 CHROMOSOME_IV 2711677 2712426 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm8894_external
      tm8894_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 8894
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00050885
    Transcript: Y94H6A.12b.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 1/1
        Exon_number: 2/2
      Y94H6A.12a.1 VEP_consequence: splice_acceptor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 3/4
        Exon_number: 4-5/5
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 39345/39346-40093/40094 (748 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele