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WormBase Tree Display for Variation: WBVar02149390

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Name Class

WBVar02149390EvidencePaper_evidenceWBPaper00055989
NamePublic_nameknu709
Sequence_detailsSeqStatusPending_curation
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryCOP
StatusLive
AffectsGeneWBGene00016421
DescriptionPhenotype_not_observedWBPhenotype:0000688Paper_evidenceWBPaper00055989
Curator_confirmedWBPerson712
Remarkcdc-7(lia1) were substantially less likely to be infertile and infertility did not correspond to temperature (for 25 degC, 20 degC and 16 degC respectively, percent sterile = 0%, 10%, 4%. Total n= 50, 49, 45. Number of plates with progeny = 48, 44, 43. Number of plates without progeny = 0, 5, 2).Paper_evidenceWBPaper00055989
Curator_confirmedWBPerson712
ImageWBPicture0000014384Paper_evidenceWBPaper00055989
Curator_confirmedWBPerson712
Variation_effectNullPaper_evidenceWBPaper00055989
Curator_confirmedWBPerson712
Phenotype_assayTemperature16, 22, 25Paper_evidenceWBPaper00055989
Curator_confirmedWBPerson712
GenotypeCK609 CK609 cdc-7(tm4391) I - outcrossed 4x to N2Paper_evidenceWBPaper00055989
Curator_confirmedWBPerson712
ReferenceWBPaper00055989
RemarkCreated in the nameserver by Karen Yook
WBPaper00055989 cdc-7 lia1 deletes 2,284 nucleotides, beginning 163 nucleotides upstream of the cdc-7 ATG start and ending 136 nucleotides downstream of the cdc-7 TAA stop, within the cdc-7 3 Prime UTR. a novel deletion allele lia1, which is a 2,284 nucleotide deletion and an 18 nucleotide insertion, removing the entire cdc-7 coding sequence (Figure 1A).
MethodAllele