WormBase Tree Display for Variation: WBVar02149390
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WBVar02149390 | Evidence | Paper_evidence | WBPaper00055989 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | knu709 | ||||||
Sequence_details | SeqStatus | Pending_curation | ||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Laboratory | COP | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016421 | ||||||
Description | Phenotype_not_observed | WBPhenotype:0000688 | Paper_evidence | WBPaper00055989 | ||||
Curator_confirmed | WBPerson712 | |||||||
Remark | cdc-7(lia1) were substantially less likely to be infertile and infertility did not correspond to temperature (for 25 degC, 20 degC and 16 degC respectively, percent sterile = 0%, 10%, 4%. Total n= 50, 49, 45. Number of plates with progeny = 48, 44, 43. Number of plates without progeny = 0, 5, 2). | Paper_evidence | WBPaper00055989 | |||||
Curator_confirmed | WBPerson712 | |||||||
Image | WBPicture0000014384 | Paper_evidence | WBPaper00055989 | |||||
Curator_confirmed | WBPerson712 | |||||||
Variation_effect | Null | Paper_evidence | WBPaper00055989 | |||||
Curator_confirmed | WBPerson712 | |||||||
Phenotype_assay | Temperature | 16, 22, 25 | Paper_evidence | WBPaper00055989 | ||||
Curator_confirmed | WBPerson712 | |||||||
Genotype | CK609 CK609 cdc-7(tm4391) I - outcrossed 4x to N2 | Paper_evidence | WBPaper00055989 | |||||
Curator_confirmed | WBPerson712 | |||||||
Reference | WBPaper00055989 | |||||||
Remark | Created in the nameserver by Karen Yook | |||||||
WBPaper00055989 cdc-7 lia1 deletes 2,284 nucleotides, beginning 163 nucleotides upstream of the cdc-7 ATG start and ending 136 nucleotides downstream of the cdc-7 TAA stop, within the cdc-7 3 Prime UTR. a novel deletion allele lia1, which is a 2,284 nucleotide deletion and an 18 nucleotide insertion, removing the entire cdc-7 coding sequence (Figure 1A). | ||||||||
Method | Allele |