WormBase Tree Display for Variation: WBVar02149866

WBVar02149866 Evidence: Person_evidence: WBPerson31088
  Name: Public_name: mg584
    Other_name: CE30108:p.Pro117Ser
      R12B2.5b.2:c.340_342delinsAGT
      CE25078:p.Pro114Ser
      R12B2.5a.3:c.349_351delinsAGT
      R12B2.5a.2:c.349_351delinsAGT
      R12B2.5a.1:c.349_351delinsAGT
      R12B2.5b.1:c.340_342delinsAGT
    HGVSg: CHROMOSOME_III:g.5832714_5832716delinsACT
  Sequence_details: SMap: S_parent: Sequence: R12B2
    Flanking_sequences: aacaggtggatttcttgcctgagctgatgt ttgtggatctggaggcacaggagctcgata
    Mapping_target: R12B2
    Type_of_mutation: Substitution: TGG ACT
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00007967
    Laboratory: GR
    Status: Live
  Affects: Gene: WBGene00007016
    Transcript: R12B2.5a.2 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: R12B2.5a.2:c.349_351delinsAGT
        HGVSp: CE30108:p.Pro117Ser
        cDNA_position: 619-621
        CDS_position: 349-351
        Protein_position: 117
        Exon_number: 5/10
        Codon_change: CCA/AGT
        Amino_acid_change: P/S
      R12B2.5b.2 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: R12B2.5b.2:c.340_342delinsAGT
        HGVSp: CE25078:p.Pro114Ser
        cDNA_position: 605-607
        CDS_position: 340-342
        Protein_position: 114
        Exon_number: 5/9
        Codon_change: CCA/AGT
        Amino_acid_change: P/S
      R12B2.5a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: R12B2.5a.1:c.349_351delinsAGT
        HGVSp: CE30108:p.Pro117Ser
        cDNA_position: 613-615
        CDS_position: 349-351
        Protein_position: 117
        Exon_number: 5/9
        Codon_change: CCA/AGT
        Amino_acid_change: P/S
      R12B2.5b.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: R12B2.5b.1:c.340_342delinsAGT
        HGVSp: CE25078:p.Pro114Ser
        cDNA_position: 604-606
        CDS_position: 340-342
        Protein_position: 114
        Exon_number: 5/10
        Codon_change: CCA/AGT
        Amino_acid_change: P/S
      R12B2.5a.3 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: R12B2.5a.3:c.349_351delinsAGT
        HGVSp: CE30108:p.Pro117Ser
        cDNA_position: 576-578
        CDS_position: 349-351
        Protein_position: 117
        Exon_number: 5/10
        Codon_change: CCA/AGT
        Amino_acid_change: P/S
  Genetics: Interpolated_map_position: III -1.43928
  Description: Phenotype: WBPhenotype:0001236 Paper_evidence: WBPaper00056290
        Curator_confirmed: WBPerson44544
        Remark: expression of mgIs73[cyp-14A4p::gfp] transgene increased Paper_evidence: WBPaper00056290
            Curator_confirmed: WBPerson44544
        Phenotype_assay: Genotype: mgIs73[cyp-14A4p::gfp] Paper_evidence: WBPaper00056290
              Curator_confirmed: WBPerson44544
  Reference: WBPaper00056290
  Remark: alt_det = CCA to AGT Person_evidence: WBPerson31088
      Curator_confirmed: WBPerson51134
    Variation information submitted by WBPerson31088 on 2021-07-12_10:41:07 via the Allele submission form. Curator_confirmed: WBPerson51134
    Curated on the positive strand as TGG to ACT Curator_confirmed: WBPerson51134
  Method: Substitution_allele