WormBase Tree Display for Variation: WBVar02152149

WBVar02152149 Name: Public_name: tm11847
    Other_name: Y54G2A.29.1:c.134+8_367+156del
    HGVSg: CHROMOSOME_IV:g.3028289_3028791del
  Sequence_details: SMap: S_parent: Sequence: Y54G2A
    Flanking_sequences: tgcaaatctacacgtcagcctgtgtctagg cacttacctcttctcgctaacttttccggc
    Mapping_target: Y54G2A
    Source_location: 7 CHROMOSOME_IV 3028288 3028792 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm11847_external
      tm11847_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 11847
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00305824
      WBGene00021893
    Transcript: Y54G2A.78
      Y54G2A.29.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y54G2A.29.1:c.134+8_367+156del
        Intron_number: 2-4/9
        Exon_number: 3-4/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: IV
  Remark: 278067/278068-278570/278571(503 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele