WormBase Tree Display for Variation: WBVar02152476

WBVar02152476 Name: Public_name: tm12207
    HGVSg: CHROMOSOME_X:g.3158316_3158549del
  Sequence_details: SMap: S_parent: Sequence: C15C7
    Flanking_sequences: ttcaattgttgttacgcaaacaaaactagt ttgtccatattatgataacgctttttaatg
    Mapping_target: C15C7
    Source_location: 7 CHROMOSOME_X 3158315 3158550 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm12207_external
      tm12207_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 12207
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00201500
      WBGene00200956
    Transcript: C15C7.13 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-40
        Exon_number: 1/1
      C15C7.11 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: 33-?
        Exon_number: 1/1
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Remark: 22677/22678-22911/22912(234 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele