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WormBase Tree Display for Variation: WBVar02152827

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Name Class

WBVar02152827NamePublic_namerp4
Sequence_detailsSeqStatusPending_curation
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00047495
LaboratoryRJP
StatusLive
AffectsGeneWBGene00001210
Possibly_affectsWBGene00001210Paper_evidenceWBPaper00059324
RemarkCGC_name egl-46
DescriptionPhenotypeWBPhenotype:0000216Paper_evidenceWBPaper00059324
Curator_confirmedWBPerson712
Remarkexhibits a loss of Pgcy-33::gfp expression; exhibits the same phenotype as the previously published rp13 deletion allele, which is an out-of-frame deletion that removes the zinc finger domainsPaper_evidenceWBPaper00059324
Curator_confirmedWBPerson712
EQ_annotationsAnatomy_termWBbt:0006825PATO:0000460Paper_evidenceWBPaper00059324
Curator_confirmedWBPerson712
Phenotype_assayGenotypeRJP56 egl-46(rp4); rpIs3(Pgcy-33::gfp); vsIs33(Pdop-3::rfp)Paper_evidenceWBPaper00059324
Curator_confirmedWBPerson712
WBPhenotype:0000961Paper_evidenceWBPaper00059324
Curator_confirmedWBPerson712
Remarkexhibits a loss of Pgcy-33::gfp expression; exhibits the same phenotype as the previously published rp13 deletion allele, which is an out-of-frame deletion that removes the zinc finger domainsPaper_evidenceWBPaper00059324
Curator_confirmedWBPerson712
EQ_annotationsAnatomy_termWBbt:0006825PATO:0000460Paper_evidenceWBPaper00059324
Curator_confirmedWBPerson712
Phenotype_assayGenotypeRJP56 egl-46(rp4); rpIs3(Pgcy-33::gfp); vsIs33(Pdop-3::rfp)Paper_evidenceWBPaper00059324
Curator_confirmedWBPerson712
ReferenceWBPaper00059324
Remark[2020-02-25T21:04:24.057Z WBPerson712] New Variation: WBPaper00059324 The new lesion we identified egl-46(rp4) (TGC>TAC) causes a single amino acid change in a highly conserved cysteine residue (C185Y) that lies in the first zinc finger domain of EGL-46,Curator_confirmedWBPerson712
MethodAllele