WormBase Tree Display for Variation: WBVar02154137

WBVar02154137 Evidence: Curator_confirmed: WBPerson1983
  Name: Public_name: ve561
    Other_name: B0361.8.1:c.109_*94del
    HGVSg: CHROMOSOME_III:g.7287863_7290440del
  Sequence_details: SMap: S_parent: Sequence: B0361
    Flanking_sequences: cgatcagtttgaaatccataggaaagtttc gaatccagaataaaggctgaatggtataat
    Mapping_target: B0361
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Engineered_allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00047467
    Production_method: CRISPR_Cas9
    Status: Live
  Affects: Gene: WBGene00015162
    Transcript: B0361.8.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,stop_lost,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: B0361.8.1:c.109_*94del
        cDNA_position: 123-1521
        CDS_position: 109-?
        Protein_position: 37-?
        Intron_number: 2-9/10
        Exon_number: 2-11/11
  Remark: Whole gene deletions made by the Rougvie, Moerman, Hutter and Sternberg labs that replace the coding sequence with a [LoxP + myo-2p::GFP::unc-54 3Prime UTR + rps-27p::neoR::unc-54 3Prime UTR + LoxP] cassette.
    Allele Description:+/mT1[umnIs52] II; algn-11(ve561[LoxP + myo-2p::GFP::unc-54 3' UTR + rps-27p::neoR::unc-54 3' UTR + LoxP])/mT1 [dpy-10(e128)] III
  Method: Engineered_allele