WormBase Tree Display for CDS: B0273.4c
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| B0273.4c | Evidence | Curator_confirmed | WBPerson4025 | |||
|---|---|---|---|---|---|---|
| Inferred_automatically | make_isoforms.pl | |||||
| SMap | S_parent | Sequence | B0273 | |||
| Structure | Source_exons | 1 | 82 | |||
| 12074 | 12198 | |||||
| 19438 | 19636 | |||||
| 26399 | 26502 | |||||
| 26802 | 26976 | |||||
| 28833 | 29199 | |||||
| 29654 | 30342 | |||||
| 30792 | 31708 | |||||
| 32225 | 32410 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q26261 | ||
| UniProtIsoformAcc | Q26261-2 | |||||
| UniProt | UniProtAcc | Q26261 | ||||
| UniProt_GCRP | UniProtAcc | Q26261 | ||||
| AlphaFold | entry | Q26261 | ||||
| NCBI_protein | GI_number | GI:563403423 | ||||
| Protein_id | CHROMOSOME_IV | CDK13451 | 1 | |||
| DB_remark | UNC-5 protein; contains similarity to Pfam domains PF00090 (Thrombospondin type 1 domain), PF00531 (Death domain), PF00791 (ZU5 domain), PF13895 (Immunoglobulin domain), PF17217 (UPA domain); contains similarity to Interpro domains IPR003598 (Immunoglobulin subtype 2), IPR000884 (Thrombospondin type-1 (TSP1) repeat), IPR036383 (Thrombospondin type-1 (TSP1) repeat superfamily), IPR033772 (UPA domain), IPR003599 (Immunoglobulin subtype), IPR011029 (Death-like domain superfamily), IPR000906 (ZU5 domain), IPR000488 (Death domain), IPR037936 (Netrin receptor UNC5), IPR013783 (Immunoglobulin-like fold), IPR036179 (Immunoglobulin-like domain superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Curator_confirmed | WBPerson4025 | ||||
| Feature_evidence | WBsf128523 | |||||
| Visible | Gene | WBGene00006745 | ||||
| Corresponding_transcript | B0273.4c.1 | |||||
| Corresponding_protein | CE16791 | |||||
| Corresponding_PCR_product | cenix:73-f9 | |||||
| mv_B0273.4a | ||||||
| mv_B0273.4b | ||||||
| sjj_B0273.4 | ||||||
| Corresponding_oligo_set (23) | ||||||
| Matching_cDNA (16) | ||||||
| RNAi_result (14) | ||||||
| Microarray_results (26) | ||||||
| Brief_identification | Netrin receptor unc-5 | Accession_evidence | UniProt | SP:Q26261 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 28 Nov 2013 00:00:00 | WBPerson4025 | ||||
| Remark | [131008 gw3] Autoconversion from AG1201_B0273.4.T2. Created this isoform based on the SL1 site. | Curator_confirmed | WBPerson4025 | |||
| Feature_evidence | WBsf128523 | |||||
| Method | curated |
