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WormBase Tree Display for CDS: CBG05555b

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Name Class

CBG05555bSMapS_parentSequencecb25.fpc0129
StructureSource_exons (33)
DB_infoDB_remarkCBR-UNC-80 protein; contains similarity to Pfam domain PF15778 (UNC80 N-terminal); contains similarity to Interpro domains IPR031542 (Cation channel complex component UNC80, N-terminal), IPR016024 (Armadillo-type fold)
OriginFrom_laboratoryCB
SpeciesCaenorhabditis briggsae
PropertiesCodingCDS
Prediction_statusPartially_confirmed
IsoformCurator_confirmedWBPerson4025
Artificial_intronLow_quality_sequence
VisibleGeneWBGene00027983
Corresponding_transcriptCBG05555b.1
Corresponding_proteinCBP38139
Corresponding_oligo_setGPL8303_CB6_WBGene00027983_A
GPL14143_CBG05555_10275-10334_0.939_4_C
GPL14143_CBG05555_10507-10566_0.648_979_B
GPL14143_CBG05555_10613-10672_0.966_1_A
Microarray_resultsGPL8303_CB6_WBGene00027983_A
GPL14143_CBG05555_10275-10334_0.939_4_C
GPL14143_CBG05555_10507-10566_0.648_979_B
GPL14143_CBG05555_10613-10672_0.966_1_A
RNASeq_FPKM (9)
Last_reviewed31 Aug 2016 10:21:23WBPerson4025
Remark[160826 gw3] This structure has been created based on the Trinity model 'briggsae_GG3244|c2_g2_i1-chrV-1b.extended'.Curator_confirmedWBPerson4025
Methodcurated