WormBase Tree Display for Sequence: D2007
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D2007 | DNA | D2007 | 13650 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00017042 | 4226 | 9891 | |
WBGene00195783 | 1478 | 1584 | ||||
WBGene00017045 | 13453 | 11210 | ||||
WBGene00017044 | 278 | 1237 | ||||
WBGene00017041 | 10729 | 11343 | ||||
CDS_child (132) | ||||||
Transcript | D2007.6 | 1478 | 1584 | |||
D2007.1.1 | 10729 | 11343 | ||||
D2007.2a.1 | 4226 | 9891 | ||||
D2007.2a.2 | 4230 | 9884 | ||||
D2007.2a.3 | 7698 | 9884 | ||||
D2007.2b.1 | 4237 | 9773 | ||||
D2007.2c.1 | 8079 | 9773 | ||||
D2007.2d.1 | 9021 | 9773 | ||||
D2007.4.1 | 278 | 1237 | ||||
D2007.5.1 | 13453 | 11210 | ||||
PCR_product (22) | ||||||
Allele (185) | ||||||
Oligo_set | Aff_D2007.1 | 10737 | 11203 | |||
Aff_D2007.2 | 7732 | 9771 | ||||
Aff_D2007.3 | 4238 | 4393 | ||||
Aff_D2007.4 | 281 | 1115 | ||||
Aff_D2007.5 | 12164 | 11343 | ||||
Feature_object | WBsf993253 | 1369 | 1519 | |||
WBsf993254 | 3208 | 3358 | ||||
WBsf993255 | 5668 | 5818 | ||||
WBsf993256 | 6168 | 6318 | ||||
WBsf993257 | 6928 | 7078 | ||||
WBsf993258 | 9568 | 9656 | ||||
WBsf1015364 | 1369 | 1519 | ||||
WBsf1015365 | 3228 | 3378 | ||||
WBsf009923 | 13454 | 13453 | ||||
WBsf016614 | 279 | 280 | ||||
WBsf020520 | 10734 | 10735 | ||||
WBsf023636 | 11349 | 11350 | ||||
WBsf025382 | 11329 | 11334 | ||||
WBsf073654 | 1187 | 1187 | ||||
WBsf073655 | 9843 | 9843 | ||||
WBsf073656 | 11205 | 11205 | ||||
WBsf073657 | 11253 | 11253 | ||||
WBsf074592 | 1211 | 1211 | ||||
WBsf075057 | 1208 | 1208 | ||||
WBsf075991 | 1259 | 1259 | ||||
WBsf076747 | 1190 | 1190 | ||||
WBsf077597 | 1277 | 1277 | ||||
WBsf077598 | 11191 | 11191 | ||||
WBsf079169 | 1213 | 1213 | ||||
WBsf079170 | 11203 | 11203 | ||||
WBsf080454 | 1241 | 1241 | ||||
WBsf126253 | 7703 | 7704 | ||||
WBsf127365 | 13454 | 13453 | ||||
WBsf127407 | 279 | 280 | ||||
WBsf127636 | 4231 | 4232 | ||||
WBsf161547 | 8982 | 8983 | ||||
WBsf162342 | 11253 | 11253 | ||||
WBsf165321 | 1245 | 1245 | ||||
WBsf165322 | 9017 | 9017 | ||||
WBsf166474 | 9841 | 9841 | ||||
WBsf168537 | 1203 | 1203 | ||||
WBsf168538 | 8930 | 8930 | ||||
WBsf169954 | 1226 | 1226 | ||||
WBsf169955 | 11249 | 11249 | ||||
WBsf171024 | 10734 | 10735 | ||||
WBsf174816 | 1249 | 1250 | ||||
WBsf225356 | 1119 | 1190 | ||||
WBsf225357 | 1119 | 1245 | ||||
WBsf225358 | 9774 | 9880 | ||||
WBsf225359 | 11206 | 11233 | ||||
WBsf225360 | 11206 | 11348 | ||||
WBsf227086 | 11338 | 11210 | ||||
WBsf246713 | 11192 | 11191 | ||||
WBsf247735 | 11290 | 11291 | ||||
WBsf247736 | 9881 | 9882 | ||||
WBsf247737 | 1248 | 1249 | ||||
WBsf273250 | 4696 | 4695 | ||||
WBsf273411 | 11252 | 11253 | ||||
WBsf273871 | 11372 | 11373 | ||||
WBsf274095 | 11355 | 11356 | ||||
WBsf274105 | 1012 | 1013 | ||||
WBsf274154 | 11354 | 11355 | ||||
WBsf616632 | 11209 | 11208 | ||||
WBsf617429 | 1174 | 1175 | ||||
WBsf617589 | 1227 | 1228 | ||||
WBsf617845 | 11263 | 11264 | ||||
WBsf618028 | 9854 | 9855 | ||||
WBsf618686 | 9870 | 9871 | ||||
WBsf619128 | 11241 | 11242 | ||||
WBsf619251 | 11866 | 11867 | ||||
WBsf619643 | 1262 | 1263 | ||||
WBsf620133 | 8592 | 8591 | ||||
WBsf620484 | 8594 | 8593 | ||||
WBsf959513 | 4231 | 4232 | ||||
WBsf959514 | 6634 | 6633 | ||||
WBsf959515 | 8061 | 8062 | ||||
WBsf959516 | 10889 | 10890 | ||||
WBsf959517 | 11565 | 11566 | ||||
WBsf959518 | 11635 | 11634 | ||||
WBsf959519 | 12870 | 12869 | ||||
WBsf393962 | 10402 | 13029 | ||||
WBsf394846 | 10389 | 11213 | ||||
WBsf394914 | 11416 | 12976 | ||||
WBsf398142 | 10694 | 10695 | ||||
WBsf398891 | 6167 | 6188 | ||||
WBsf401706 | 10503 | 11007 | ||||
WBsf402432 | 9559 | 9875 | ||||
WBsf402949 | 10698 | 11190 | ||||
WBsf405024 | 1346 | 1602 | ||||
WBsf406021 | 1346 | 1602 | ||||
WBsf407952 | 5602 | 5634 | ||||
WBsf409274 | 10626 | 10632 | ||||
WBsf409328 | 9813 | 10192 | ||||
WBsf411830 | 10373 | 12463 | ||||
WBsf412555 | 12702 | 13154 | ||||
WBsf413752 | 8563 | 8631 | ||||
WBsf413973 | 1356 | 1619 | ||||
WBsf414456 | 1378 | 1577 | ||||
WBsf414627 | 10423 | 12503 | ||||
WBsf417542 | 10248 | 11061 | ||||
WBsf418834 | 10546 | 12346 | ||||
WBsf419157 | 10442 | 11845 | ||||
WBsf419444 | 10439 | 13054 | ||||
WBsf419679 | 9687 | 9703 | ||||
WBsf420185 | 10593 | 11753 | ||||
WBsf420840 | 11963 | 12314 | ||||
WBsf421022 | 12605 | 12853 | ||||
WBsf421514 | 1333 | 1534 | ||||
WBsf422165 | 10505 | 11082 | ||||
WBsf422947 | 10516 | 13050 | ||||
WBsf423725 | 2595 | 2652 | ||||
WBsf425155 | 10517 | 10951 | ||||
WBsf433376 | 10412 | 10716 | ||||
WBsf433895 | 11608 | 12091 | ||||
WBsf439431 | 1370 | 1564 | ||||
WBsf439897 | 1326 | 1572 | ||||
WBsf440745 | 9575 | 10098 | ||||
WBsf441453 | 10546 | 11019 | ||||
WBsf441686 | 11230 | 11396 | ||||
WBsf441697 | 11661 | 11816 | ||||
WBsf441999 | 10305 | 10313 | ||||
WBsf268604 | 2565 | 2566 | ||||
WBsf898195 | 9855 | 9855 | ||||
WBsf645391 | 1480 | 1482 | ||||
WBsf645392 | 10615 | 10696 | ||||
WBsf651248 | 13516 | 13387 | ||||
WBsf659232 | 6272 | 6283 | ||||
WBsf659233 | 6303 | 6343 | ||||
WBsf680336 | 1806 | 1809 | ||||
WBsf680337 | 13443 | 13463 | ||||
WBsf702006 | 6224 | 6176 | ||||
WBsf717940 | 1356 | 1619 | ||||
Feature_data | D2007:Polysome | 1 | 13650 | |||
D2007:TranscriptionallyActiveRegion | 1 | 13650 | ||||
D2007:ChIPSeqTF | 1 | 13650 | ||||
D2007:TRF | 1 | 13650 | ||||
D2007:Dust | 1 | 13650 | ||||
D2007:inverted | 1 | 13650 | ||||
Homol_data (18) | ||||||
Structure | From | Source | CHROMOSOME_III | |||
Overlap_right | C50C3 | 13451 | ||||
Overlap_left | C14B9 | |||||
DB_info | Database | EMBL | NDB_AC | FO080532 | ||
NDB_ID | _L16560 | |||||
NDB_SV | FO080532.2 | |||||
Secondary_accession | L16560 | |||||
DB_remark | The 5' clone is C14B9, 200 bp overlap; the 3' clone is C50C3, 200 bp overlap. Actual start of this clone is at base position 18605 of C14B9; actual end is at 7663 of C50C3. | |||||
[121025] Sequence correction: SNP 0 bases @ 9856 | ||||||
[121025] Sequence correction WBsf268604 : Deletion G-1 bases @ 2566 | ||||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Favello A | ||||
Favello T | ||||||
From_laboratory | RW | |||||
Date | 12 May 1993 00:00:00 | |||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | D2007 | ||||
Reference | WBPaper00015050 | |||||
Remark | ?Text | |||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 566caee6547676d555351b95d81906dc | ||||
Status | Finished | |||||
Submitted | 12 May 1993 00:00:00 | |||||
Map | Sequence-III | |||||
Interpolated_map_position | III | -0.375565 | ||||
Method | Genomic_canonical |