WormBase Tree Display for Sequence: F08C6
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F08C6 | DNA | F08C6 | 36890 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00202081 | 29148 | 28939 | |
WBGene00200670 | 25603 | 25736 | ||||
WBGene00017241 | 14414 | 23112 | ||||
WBGene00198746 | 28887 | 28555 | ||||
WBGene00197499 | 33131 | 33012 | ||||
WBGene00195950 | 29932 | 29784 | ||||
WBGene00196271 | 26084 | 26356 | ||||
WBGene00006827 | 15676 | 12431 | ||||
WBGene00007059 | 7380 | 10202 | ||||
WBGene00196948 | 30209 | 30061 | ||||
WBGene00006063 | 4881 | 6871 | ||||
WBGene00200824 | 26489 | 26077 | ||||
WBGene00195886 | 27435 | 27566 | ||||
WBGene00303053 | 15685 | 15647 | ||||
WBGene00017243 | 1462 | 4182 | ||||
WBGene00017244 | 11779 | 10198 | ||||
WBGene00201705 | 23257 | 23127 | ||||
CDS_child (325) | ||||||
Transcript (20) | ||||||
Nongenomic | yk303a12 | 12509 | 15303 | |||
PCR_product (24) | ||||||
Allele (573) | ||||||
Oligo_set | Aff_F08C6.1 | 35353 | 36848 | |||
Aff_F08C6.2 | 21604 | 22789 | ||||
Aff_F08C6.3 | 9302 | 10051 | ||||
Aff_F08C6.4 | 5743 | 6509 | ||||
Aff_F08C6.5 | 2186 | 3864 | ||||
Aff_F08C6.6 | 11004 | 10324 | ||||
Aff_F08C6.7 | 14140 | 12696 | ||||
Feature_object (369) | ||||||
Feature_data | F08C6:Polysome | 1 | 36890 | |||
F08C6:TranscriptionallyActiveRegion | 1 | 36890 | ||||
F08C6:ChIPSeqTF | 1 | 36890 | ||||
F08C6:TRF | 1 | 36890 | ||||
F08C6:Dust | 1 | 36890 | ||||
F08C6:inverted | 1 | 36890 | ||||
Homol_data (20) | ||||||
Structure | From | Source | CHROMOSOME_X | |||
Overlap_right | C44E12 | 36591 | ||||
Overlap_left | PDB1 | |||||
Clone_left_end | F08C6 | 1 | ||||
C44E12 | 25972 | |||||
Clone_right_end | F08C6 | 36594 | ||||
DB_info | Database | EMBL | NDB_AC | FO080866 | ||
NDB_ID | _U29378 | |||||
NDB_SV | FO080866.2 | |||||
Secondary_accession | U29378 | |||||
DB_remark | The 5' clone is PDB1, 1100 bp overlap; the 3' clone is C44E12, 300 bp overlap. Actual start of this clone is at base position 1 of F08C6; actual end is at 36592 of F08C6. | |||||
[121025] Sequence correction: SNP 0 bases @ 8661 | ||||||
[121025] Sequence correction: SNP 0 bases @ 30993 | ||||||
[121025] Sequence correction WBsf268053 : Insertion C1 bases from @ 2060 | ||||||
[121025] Sequence correction WBsf268159 : Insertion G1 bases from @ 20615 | ||||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Bentley D | ||||
Wilson RK | ||||||
From_laboratory | RW | |||||
Date | 27 Jan 1995 00:00:00 | |||||
Species | Caenorhabditis elegans | |||||
Visible | Clone | F08C6 | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 40c3b34591d34d22a65e7527e0a2b190 | ||||
Status | Finished | |||||
Submitted | 27 Jan 1995 00:00:00 | |||||
Map | Sequence-X | |||||
Interpolated_map_position | X | -1.49225 | ||||
Method | Genomic_canonical |