WormBase Tree Display for CDS: F42G2.3
expand all nodes | collapse all nodes | view schema
| F42G2.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F42G2 | |||
| Structure | Source_exons | 1 | 71 | |||
| 123 | 1016 | |||||
| 1067 | 1181 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O17100 | ||
| UniProt | UniProtAcc | O17100 | ||||
| UniProt_GCRP | UniProtAcc | O17100 | ||||
| AlphaFold | entry | O17100 | ||||
| NCBI_protein | GI_number | GI:351062309 | ||||
| TREEFAM | TREEFAM_ID | TF322489 | ||||
| Protein_id | CHROMOSOME_II | CCD70283 | 1 | |||
| DB_remark | FBXC-20 protein; contains similarity to Pfam domain PF12078 (Domain of unknown function (DUF3557)); contains similarity to Interpro domain IPR021942 (Protein of unknown function DUF3557) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00018352 | ||||
| Corresponding_transcript | F42G2.3.1 | |||||
| Corresponding_protein | CE10310 | |||||
| Corresponding_PCR_product | cenix:69-f7 | |||||
| mv_F42G2.3 | ||||||
| sjj2_F42G2.3 | ||||||
| sjj_F42G2.3 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA | OSTR117F9_1 | Inferred_automatically | transcript_builder.pl | |||
| yk723g12.5 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_154998 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF117F9_1 | Inferred_automatically | transcript_builder.pl | ||||
| yk723g12.3 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_274990 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_147307 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG7161|c3_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_62663 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00032144 | |||||
| WBRNAi00047112 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | F-box C protein | Accession_evidence | UniProt | TR:O17100 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
