WormBase Tree Display for Gene: WBGene00018352
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| WBGene00018352 | SMap | S_parent | Sequence | F42G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxc-20 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F42G2.3 | ||||||||
| Molecular_name | F42G2.3 | ||||||||
| F42G2.3.1 | |||||||||
| CE10310 | |||||||||
| Other_name | CELE_F42G2.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxc-20 | ||||||||
| DB_info | Database | AceView | gene | 2C711 | |||||
| WormQTL | gene | WBGene00018352 | |||||||
| WormFlux | gene | WBGene00018352 | |||||||
| NDB | locus_tag | CELE_F42G2.3 | |||||||
| NCBI | gene | 173595 | |||||||
| RefSeq | protein | NM_061871.7 | |||||||
| TREEFAM | TREEFAM_ID | TF322489 | |||||||
| TrEMBL | UniProtAcc | O17100 | |||||||
| UniProt_GCRP | UniProtAcc | O17100 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-20 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxc | ||||||||
| Allele (111) | |||||||||
| Strain | WBStrain00003677 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029335 | ||||||||
| Ortholog (18) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpppappp; ABalppppaa; PVP; amphid neurons; and lateral ganglion based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including aldicarb; 1-methylnicotinamide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F42G2.3 | |||||||
| Corresponding_transcript | F42G2.3.1 | ||||||||
| Associated_feature | WBsf644010 | ||||||||
| WBsf657387 | |||||||||
| WBsf220929 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032144 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047112 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6048 | ||||||||
| Expr1025035 | |||||||||
| Expr1037902 | |||||||||
| Expr1150979 | |||||||||
| Expr2011706 | |||||||||
| Expr2029945 | |||||||||
| Drives_construct | WBCnstr00004113 | ||||||||
| WBCnstr00026588 | |||||||||
| Construct_product | WBCnstr00026588 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (161) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | II | Position | -13.8223 | Error | 0.001856 | |||
| Positive | Positive_clone | F42G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
