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WormBase Tree Display for CDS: OVOC3490

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Name Class

OVOC3490EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_199
StructureSource_exons (14)
DB_infoDB_remarkcontains similarity to Pfam domain PF01607 (Chitin binding Peritrophin-A domain); contains similarity to Interpro domains IPR036508 (Chitin binding domain superfamily), IPR002557 (Chitin binding domain)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00240299
Corresponding_transcriptOVOC3490.1
Corresponding_proteinOVP13130
Matching_cDNAovolvulus_GG570|c188_g1_i6Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:0000104 (15)
WBls:00001070.062238From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.047973From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
0.080794From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
0.146543From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:00006640From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Remark[140324 es9] Merged OVOC3490, OVOC3491 and OVOC3492 based on RNA-Seq, SL1 and protein evidence data.Curator_confirmedWBPerson2062
Methodcurated