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WormBase Tree Display for CDS: PPA04999

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Name Class

PPA04999SMapS_parentSequencePPA_ChrV
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S311-8.28
TREEFAMTREEFAM_IDTF315716
DB_remarkPPA-UNC-55 protein; contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00094553
Corresponding_transcriptPPA04999.1
Corresponding_proteinPP65260
Corresponding_oligo_setGPL14372_Probes_25605
GPL14372_Probes_25606
GPL14372_Probes_25607
Microarray_resultsGPL14372_Probes_25605
GPL14372_Probes_25606
GPL14372_Probes_25607
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S311-8.28Curator_confirmedWBPerson4055
Methodcurated