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WormBase Tree Display for CDS: PPA27795

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Name Class

PPA27795SMapS_parentSequencePPA_ChrV
StructureSource_exons (22)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S13-21.60
TREEFAMTREEFAM_IDTF313242
DB_remarkPPA-UNC-18 protein; contains similarity to Pfam domain PF00995 (Sec1 family); contains similarity to Interpro domains IPR001619 (Sec1-like protein), IPR043127 (Sec1-like, domain 3a), IPR043154 (Sec1-like, domain 1), IPR036045 (Sec1-like superfamily), IPR027482 (Sec1-like, domain 2)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00117349
Corresponding_transcriptPPA27795.1
Corresponding_proteinPP69402
Corresponding_oligo_setGPL14372_Probes_56961
Microarray_resultsGPL14372_Probes_56961
RNASeq_FPKMWBls:00000322.07244From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.44759From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S13-21.60Curator_confirmedWBPerson4055
Methodcurated