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WormBase Tree Display for CDS: PPA30875

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Name Class

PPA30875EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrII
StructureSource_exons (25)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S421-2.203
DB_remarkPPA-UNC-104.3 protein; contains similarity to Pfam domains PF00169 (PH domain), PF12423 (Kinesin protein 1B), PF12473 (Kinesin protein); contains similarity to Interpro domains IPR022140 (Kinesin-like KIF1-type), IPR022164 (Kinesin-like), IPR001849 (Pleckstrin homology domain), IPR011993 (PH-like domain superfamily), IPR027640 (Kinesin-like protein)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00203741
Corresponding_transcriptPPA30875.1
Corresponding_proteinPP75450
Corresponding_oligo_setGPL14372_Probes_15918
GPL14372_Probes_15919
GPL14372_Probes_15921
GPL14372_Probes_15922
Microarray_resultsGPL14372_Probes_15918
GPL14372_Probes_15919
GPL14372_Probes_15921
GPL14372_Probes_15922
RNASeq_FPKMWBls:000003244.6825From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010138.5064From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed11 Sep 2019 14:14:33WBPerson4055
Remark[171116 mh6] renamed from gene-UMM-S421-2.203Curator_confirmedWBPerson4055
[190911 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated