WormBase Tree Display for CDS: T05C12.2
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| T05C12.2 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T05C12 | ||
| Structure | Source_exons (12) | ||||
| DB_info | Database | TrEMBL | UniProtAcc | Q22224 | |
| UniProt | UniProtAcc | Q22224 | |||
| UniProt_GCRP | UniProtAcc | Q22224 | |||
| AlphaFold | entry | Q22224 | |||
| NCBI_protein | GI_number | GI:7160738 | |||
| Protein_id | CHROMOSOME_II | CAA91304 | 2 | ||
| DB_remark | ACR-14 protein; contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain), PF02932 (Neurotransmitter-gated ion-channel transmembrane region); contains similarity to Interpro domains IPR038050 (Neuronal acetylcholine receptor), IPR036734 (Neurotransmitter-gated ion-channel ligand-binding domain superfamily), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding domain), IPR036719 (Neurotransmitter-gated ion-channel transmembrane domain superfamily), IPR002394 (Nicotinic acetylcholine receptor), IPR006201 (Neurotransmitter-gated ion-channel), IPR006029 (Neurotransmitter-gated ion-channel transmembrane domain) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible | Gene | WBGene00000053 | |||
| Corresponding_transcript | T05C12.2.1 | ||||
| Corresponding_protein | CE25099 | ||||
| Corresponding_PCR_product | cenix:206-e12 | ||||
| mv_T05C12.2 | |||||
| sjj_T05C12.2 | |||||
| Corresponding_oligo_set (19) | |||||
| Matching_cDNA | OSTF109E12_1 | Inferred_automatically | transcript_builder.pl | ||
| elegans_PE_SS_GG3518|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| OSTR109E12_1 | Inferred_automatically | transcript_builder.pl | |||
| elegans_PE_SS_GG3518|c1_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | WBRNAi00066388 | ||||
| WBRNAi00097922 | |||||
| WBRNAi00052489 | |||||
| WBRNAi00018218 | |||||
| WBRNAi00078345 | |||||
| WBRNAi00035191 | |||||
| Microarray_results (20) | |||||
| Brief_identification | Acetylcholine receptor subunit acr-14 | Curator_confirmed | WBPerson1983 | ||
| RNASeq_FPKM (74) | |||||
| Last_reviewed | 27 Jan 2000 00:00:00 | WBPerson1846 | |||
| Remark | [000127 dl] Prediction modified based on halfwise analysis | Curator_confirmed | WBPerson1846 | ||
| Method | curated |
