WormBase Tree Display for CDS: T09F3.3
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| T09F3.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T09F3 | |||
| Structure | Source_exons | 1 | 523 | |||
| 576 | 1008 | |||||
| 1057 | 1126 | |||||
| DB_info | Database | KEGG | KEGG_id | 1.2.1.12 | ||
| SwissProt | UniProtAcc | P04970 | ||||
| UniProt | UniProtAcc | P04970 | ||||
| UniProt_GCRP | UniProtAcc | P04970 | ||||
| AlphaFold | entry | P04970 | ||||
| NCBI_protein | GI_number | GI:3879670 | ||||
| Protein_id | CHROMOSOME_II | CAA88870 | 1 | |||
| DB_remark | GPD-1 protein; contains similarity to Pfam domains PF00044 (Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain), PF02800 (Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain); contains similarity to Interpro domains IPR020828 (Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain), IPR036291 (NAD(P)-binding domain superfamily), IPR020831 (Glyceraldehyde/Erythrose phosphate dehydrogenase family), IPR006424 (Glyceraldehyde-3-phosphate dehydrogenase, type I), IPR020829 (Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00001683 | ||||
| Corresponding_transcript | T09F3.3.1 | |||||
| Corresponding_protein | CE02343 | |||||
| Corresponding_PCR_product | cenix:202-c4 | |||||
| mv_CAA36900 | ||||||
| sjj_T09F3.3 | ||||||
| Corresponding_oligo_set | A_12_P101710 | |||||
| GPL19516_CGZ0034430 | ||||||
| GPL21109_T09F3.3.1 | ||||||
| GPL3518_CE02343 | ||||||
| GPL8304_CE_WBGene00001683_A | ||||||
| Matching_cDNA (72) | ||||||
| RNAi_result | WBRNAi00018506 | |||||
| WBRNAi00052969 | ||||||
| WBRNAi00008168 | ||||||
| WBRNAi00008043 | ||||||
| WBRNAi00114592 | ||||||
| WBRNAi00046227 | ||||||
| WBRNAi00014257 | ||||||
| WBRNAi00115891 | ||||||
| Microarray_results | SMD_T09F3.3 | |||||
| A_12_P101710 | ||||||
| GPL19516_CGZ0034430 | ||||||
| GPL19516_CGZ0034431 | ||||||
| GPL21109_T09F3.3.1 | ||||||
| GPL3518_CE02343 | ||||||
| GPL8304_CE_WBGene00001683_A | ||||||
| Brief_identification | Glyceraldehyde-3-phosphate dehydrogenase 1 | Accession_evidence | UniProt | SP:P04970 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf008538 | |||||
| Method | curated |
