WormBase Tree Display for Gene: WBGene00000133

WBGene00000133 SMap: S_parent: Sequence: C05E11
  Identity: Version: 1
    Name: CGC_name: amt-1
      Sequence_name: C05E11.4
      Molecular_name: C05E11.4
        C05E11.4.1
        CE06770
      Other_name: CELE_C05E11.4 Accession_evidence: NDB BX284606
      Public_name: amt-1
    DB_info: Database: AceView gene XF191
        WormQTL gene WBGene00000133
        WormFlux gene WBGene00000133
        NDB locus_tag CELE_C05E11.4
        Panther gene CAEEL|WormBase=WBGene00000133|UniProtKB=P54145
          family PTHR11730
        NCBI gene 180729
        RefSeq protein NM_076383.5
        SwissProt UniProtAcc P54145
        TREEFAM TREEFAM_ID TF313588
        UniProt_GCRP UniProtAcc P54145
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: amt
    Allele (74)
    Strain: WBStrain00032482
    RNASeq_FPKM (74)
    GO_annotation: 00048219
      00048220
      00048221
      00048222
      00048223
      00048224
      00048225
      00106841
      00106842
      00106843
    Ortholog (41)
    Paralog: WBGene00004358 Caenorhabditis elegans From_analysis: Panther
      WBGene00004359 Caenorhabditis elegans From_analysis: Panther
      WBGene00000136 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00000135 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00000134 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Concise_description: amt-1 encodes a transmembrane transporter that by homology, is predicted to transport ammonium ions across the plasma membrane; as loss of amt-1 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of AMT-1 in C. elegans development and/or behavior is not yet known. Paper_evidence: WBPaper00005654
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable ammonium transmembrane transporter activity. Predicted to be involved in ammonium homeostasis and ammonium transmembrane transport. Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C05E11.4
    Corresponding_transcript: C05E11.4.1
    Other_sequence: Hbac_isotig00997
      FK802911.1
      FK808822.1
      HG02101
      HGC02422_1
    Associated_feature: WBsf1004993
      WBsf1004994
      WBsf1022810
      WBsf235605
  Experimental_info: RNAi_result: WBRNAi00039771 Inferred_automatically: RNAi_primary
      WBRNAi00010221 Inferred_automatically: RNAi_primary
      WBRNAi00028510 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024425
      Expr1143857
      Expr2009325
      Expr2027561
    Drives_construct: WBCnstr00037714
    Construct_product: WBCnstr00037714
    Microarray_results (19)
    Expression_cluster (282)
    Interaction (57)
  Map_info: Map: X Position: -7.22562 Error: 0.005176
    Positive: Positive_clone: C05E11 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene