WormBase Tree Display for Gene: WBGene00000425
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WBGene00000425 | SMap | S_parent | Sequence | ZK512 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ced | ||||||
Allele (68) | |||||||
Legacy_information | [Stanfield G] abnormal programmed cell death corpses | ||||||
[C.elegansII] n2744 : abnormal programmed cell death corpses OA3: n2745, n2832, n2833, n2834Cloned: encodes predicted novel protein. [MT] | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00043643 | ||||||
00043644 | |||||||
00043645 | |||||||
00043646 | |||||||
00043647 | |||||||
00043648 | |||||||
Ortholog (34) | |||||||
Paralog | WBGene00001651 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00001795 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001796 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00004149 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00008731 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00020972 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00021404 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00021408 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | The ced-11 gene encodes a predicted transmembrane ion channel related to the long transient receptor potential channel (LTRPC) subfamily of TRP channels found in Drosophila and mammals; CED-11 functions as a downstream effector in the programmed cell death pathway and may play a role in affecting the morphological changes seen in the nucleus, cytoplasm, and plasma membrane of apoptotic cells. | Paper_evidence | WBPaper00004159 | |||
WBPaper00022068 | |||||||
WBPaper00022724 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable monoatomic cation channel activity. Involved in apoptotic process. Predicted to be located in membrane. Expressed in apoptotic cell; head; hypodermis; and tail. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | ZK512.3 | |||||
Corresponding_transcript | ZK512.3.1 | ||||||
Other_sequence (14) | |||||||
Associated_feature | WBsf659389 | ||||||
WBsf659390 | |||||||
WBsf993579 | |||||||
WBsf1015548 | |||||||
WBsf225522 | |||||||
WBsf225523 | |||||||
WBsf225524 | |||||||
Experimental_info | RNAi_result | WBRNAi00002366 | Inferred_automatically | RNAi_primary | |||
WBRNAi00038317 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00059472 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006142 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr2040 | ||||||
Expr13488 | |||||||
Expr1011305 | |||||||
Expr1030241 | |||||||
Expr1162895 | |||||||
Expr2009842 | |||||||
Expr2028082 | |||||||
Drives_construct | WBCnstr00037551 | ||||||
Construct_product | WBCnstr00037551 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (189) | |||||||
Interaction (11) | |||||||
Map_info | Map | III | Position | 0.165457 | Error | 0.00081 | |
Well_ordered | |||||||
Positive | Positive_clone | C33D7 | |||||
ZK512 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Negative | Negative_clone | C37G7 | |||||
ZK507 | |||||||
Mapping_data | Multi_point | 2760 | |||||
2761 | |||||||
2762 | |||||||
2763 | |||||||
2764 | |||||||
2765 | |||||||
2766 | |||||||
Reference (16) | |||||||
Method | Gene |