WormBase Tree Display for Gene: WBGene00000618
expand all nodes | collapse all nodes | view schema
| WBGene00000618 | SMap | S_parent | Sequence | T10B10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-41 | Person_evidence | WBPerson345 | |||||
| Sequence_name | T10B10.1 | ||||||||
| Molecular_name | T10B10.1 | ||||||||
| T10B10.1.1 | |||||||||
| CE06399 | |||||||||
| Other_name | CELE_T10B10.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | col-41 | ||||||||
| DB_info | Database | AceView | gene | XP794 | |||||
| WormQTL | gene | WBGene00000618 | |||||||
| WormFlux | gene | WBGene00000618 | |||||||
| NDB | locus_tag | CELE_T10B10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000618|UniProtKB=Q22369 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 181610 | |||||||
| RefSeq | protein | NM_078121.5 | |||||||
| TREEFAM | TREEFAM_ID | TF319043 | |||||||
| TrEMBL | UniProtAcc | Q22369 | |||||||
| UniProt_GCRP | UniProtAcc | Q22369 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00075098 | ||||||||
| 00075099 | |||||||||
| 00107627 | |||||||||
| Ortholog (35) | |||||||||
| Paralog (165) | |||||||||
| Structured_description | Concise_description | col-41 encodes a cuticle collagen. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 03 Apr 2007 00:00:00 | ||||||||
| Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Expressed in hypodermis and vulval precursor cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10B10.1 | |||||||
| Corresponding_transcript | T10B10.1.1 | ||||||||
| Other_sequence | Dviv_isotig22981 | ||||||||
| PPC03833_1 | |||||||||
| AA624957.1 | |||||||||
| AI151640.1 | |||||||||
| HBC12411_1 | |||||||||
| AW288111.1 | |||||||||
| PP00426 | |||||||||
| FD517173.1 | |||||||||
| BMC15526_1 | |||||||||
| BF599232.1 | |||||||||
| ES741083.1 | |||||||||
| CBC05526_1 | |||||||||
| OVC04407_1 | |||||||||
| AA680423.1 | |||||||||
| EX547754.1 | |||||||||
| FD516905.1 | |||||||||
| AI313884.1 | |||||||||
| CSC00026_1 | |||||||||
| AI322093.1 | |||||||||
| EX007785.1 | |||||||||
| BF918260.1 | |||||||||
| PPC00327_1 | |||||||||
| AI665834.1 | |||||||||
| BF727495.1 | |||||||||
| CJC00992_1 | |||||||||
| AI096139.1 | |||||||||
| BU586733.1 | |||||||||
| HBC22853_1 | |||||||||
| AA618930.1 | |||||||||
| OVC09121 | |||||||||
| AI535614.1 | |||||||||
| Associated_feature | WBsf980898 | ||||||||
| WBsf980899 | |||||||||
| WBsf980900 | |||||||||
| WBsf980901 | |||||||||
| WBsf238302 | |||||||||
| WBsf238303 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr12255 | ||||||||
| Expr13630 | |||||||||
| Expr1026401 | |||||||||
| Expr1030363 | |||||||||
| Expr1156588 | |||||||||
| Expr2010394 | |||||||||
| Expr2028636 | |||||||||
| Drives_construct | WBCnstr00020502 | ||||||||
| WBCnstr00037422 | |||||||||
| WBCnstr00039890 | |||||||||
| Construct_product | WBCnstr00037422 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (230) | |||||||||
| Interaction (198) | |||||||||
| Map_info | Map | X | Position | 22.2634 | |||||
| Positive | Positive_clone | T10B10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
