WormBase Tree Display for Gene: WBGene00000668

WBGene00000668 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: W05B2
  Identity: Version: 1
    Name: CGC_name: col-93 Person_evidence: WBPerson345
      Sequence_name: W05B2.5
      Molecular_name: W05B2.5
        W05B2.5.1
        CE20147
      Other_name: CELE_W05B2.5 Accession_evidence: NDB BX284603
      Public_name: col-93
    DB_info: Database: AceView gene 3M74
        WormQTL gene WBGene00000668
        WormFlux gene WBGene00000668
        NDB locus_tag CELE_W05B2.5
        Panther gene CAEEL|WormBase=WBGene00000668|UniProtKB=Q9U348
          family PTHR24637
        NCBI gene 259335
        RefSeq protein NM_001382993.2
        TrEMBL UniProtAcc Q9U348
        UniProt_GCRP UniProtAcc Q9U348
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (24)
    RNASeq_FPKM (74)
    GO_annotation: 00099946
      00099947
      00099948
      00107663
    Ortholog (63)
    Paralog (163)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W05B2.5
    Corresponding_transcript: W05B2.5.1
    Other_sequence (23)
    Associated_feature: WBsf994220
      WBsf227538
  Experimental_info: RNAi_result (28)
    Expr_pattern: Expr1030394
      Expr1158354
      Expr2010440
      Expr2028680
    Drives_construct: WBCnstr00015936
      WBCnstr00017255
      WBCnstr00037383
      WBCnstr00038500
    Construct_product: WBCnstr00037383
    Microarray_results (12)
    Expression_cluster (299)
    Interaction: WBInteraction000030156
      WBInteraction000101713
      WBInteraction000101837
      WBInteraction000102559
      WBInteraction000103119
      WBInteraction000103153
      WBInteraction000103840
      WBInteraction000104015
      WBInteraction000104559
      WBInteraction000104789
      WBInteraction000104878
      WBInteraction000105160
      WBInteraction000105466
      WBInteraction000106104
      WBInteraction000107002
      WBInteraction000107320
      WBInteraction000107353
      WBInteraction000109196
      WBInteraction000109583
      WBInteraction000109608
      WBInteraction000109889
      WBInteraction000110153
      WBInteraction000110306
      WBInteraction000110891
      WBInteraction000111944
      WBInteraction000112617
      WBInteraction000112632
      WBInteraction000114857
      WBInteraction000115817
      WBInteraction000118354
      WBInteraction000118908
      WBInteraction000119840
      WBInteraction000120494
      WBInteraction000120761
      WBInteraction000121349
      WBInteraction000121827
      WBInteraction000121938
      WBInteraction000122288
      WBInteraction000124160
      WBInteraction000125131
      WBInteraction000127241
      WBInteraction000134907
      WBInteraction000135383
      WBInteraction000144194
      WBInteraction000146611
      WBInteraction000168572
      WBInteraction000170232
      WBInteraction000175246
      WBInteraction000181187
      WBInteraction000182353
      WBInteraction000182749
      WBInteraction000184566
      WBInteraction000190635
      WBInteraction000192031
      WBInteraction000192645
      WBInteraction000194166
      WBInteraction000197308
      WBInteraction000203742
      WBInteraction000210037
      WBInteraction000211272
      WBInteraction000213232
      WBInteraction000216093
      WBInteraction000221786
      WBInteraction000231231
      WBInteraction000233787
      WBInteraction000234215
      WBInteraction000251057
      WBInteraction000287119
      WBInteraction000294589
      WBInteraction000296902
      WBInteraction000300090
      WBInteraction000305485
      WBInteraction000305486
      WBInteraction000305487
      WBInteraction000306386
      WBInteraction000308962
      WBInteraction000310196
      WBInteraction000312082
      WBInteraction000315199
      WBInteraction000322700
      WBInteraction000331119
      WBInteraction000348959
      WBInteraction000353989
      WBInteraction000359024
      WBInteraction000360861
      WBInteraction000363667
      WBInteraction000365291
      WBInteraction000387332
      WBInteraction000390989
      WBInteraction000396314
      WBInteraction000432081
      WBInteraction000433978
      WBInteraction000436097
      WBInteraction000450710
      WBInteraction000451536
      WBInteraction000460875
      WBInteraction000464234
      WBInteraction000468194
      WBInteraction000468227
      WBInteraction000471747
  Map_info: Map: III Position: 5.81063
    Positive: Positive_clone: W05B2 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025192
    WBPaper00038491
    WBPaper00055090
    WBPaper00057312
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (5.80129)
  Method: Gene