WormBase Tree Display for Gene: WBGene00000672

WBGene00000672 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: ZK1010
  Identity: Version: 1
    Name: CGC_name: col-97 Person_evidence: WBPerson345
      Sequence_name: ZK1010.7
      Molecular_name: ZK1010.7
        ZK1010.7.1
        CE15507
      Other_name: CELE_ZK1010.7 Accession_evidence: NDB BX284603
      Public_name: col-97
    DB_info: Database: AceView gene 3O82
        WormQTL gene WBGene00000672
        WormFlux gene WBGene00000672
        NDB locus_tag CELE_ZK1010.7
        Panther gene CAEEL|WormBase=WBGene00000672|UniProtKB=O18286
          family PTHR24637
        NCBI gene 176721
        RefSeq protein NM_067299.4
        TrEMBL UniProtAcc O18286
        UniProt_GCRP UniProtAcc O18286
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (19)
    RNASeq_FPKM (74)
    GO_annotation: 00031921
      00031922
      00031923
      00107667
    Ortholog (28)
    Paralog (163)
    Structured_description: Concise_description: col-97 encodes a cuticular collagen; loss of col-97 activity via large-scale RNAi screens results in defects in body morphology and locomotion. Paper_evidence: WBPaper00027067
          Curator_confirmed: WBPerson1843
          Date_last_updated: 27 Mar 2007 00:00:00
      Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK1010.7
    Corresponding_transcript: ZK1010.7.1
    Other_sequence (99)
    Associated_feature: WBsf651563
      WBsf227706
      WBsf227707
      WBsf227708
  Experimental_info: RNAi_result: WBRNAi00006722 Inferred_automatically: RNAi_primary
      WBRNAi00027024 Inferred_automatically: RNAi_primary
      WBRNAi00021770 Inferred_automatically: RNAi_primary
      WBRNAi00059040 Inferred_automatically: RNAi_primary
      WBRNAi00059039 Inferred_automatically: RNAi_primary
      WBRNAi00027554 Inferred_automatically: RNAi_primary
      WBRNAi00006091 Inferred_automatically: RNAi_primary
      WBRNAi00038111 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027990
      Expr1030397
      Expr1162469
      Expr2010444
      Expr2028684
    Drives_construct: WBCnstr00037381
    Construct_product: WBCnstr00037381
    Microarray_results (28)
    Expression_cluster (364)
    Interaction: WBInteraction000030157
      WBInteraction000103258
      WBInteraction000104189
      WBInteraction000105725
      WBInteraction000109610
      WBInteraction000111226
      WBInteraction000111264
      WBInteraction000111416
      WBInteraction000111994
      WBInteraction000112702
      WBInteraction000113306
      WBInteraction000114863
      WBInteraction000118202
      WBInteraction000118455
      WBInteraction000119958
      WBInteraction000120218
      WBInteraction000120607
      WBInteraction000120734
      WBInteraction000121307
      WBInteraction000121632
      WBInteraction000121759
      WBInteraction000121866
      WBInteraction000121900
      WBInteraction000122313
      WBInteraction000124251
      WBInteraction000124640
      WBInteraction000125206
      WBInteraction000125939
      WBInteraction000126868
      WBInteraction000127081
      WBInteraction000127329
      WBInteraction000133593
      WBInteraction000135425
      WBInteraction000135444
      WBInteraction000138419
      WBInteraction000138519
      WBInteraction000138597
      WBInteraction000140739
      WBInteraction000141515
      WBInteraction000141691
      WBInteraction000142454
      WBInteraction000142875
      WBInteraction000143406
      WBInteraction000144142
      WBInteraction000144349
      WBInteraction000144451
      WBInteraction000144625
      WBInteraction000145471
      WBInteraction000145565
      WBInteraction000146976
      WBInteraction000147270
      WBInteraction000147636
      WBInteraction000152218
      WBInteraction000153071
      WBInteraction000161950
      WBInteraction000164294
      WBInteraction000165282
      WBInteraction000169003
      WBInteraction000176656
      WBInteraction000178752
      WBInteraction000178982
      WBInteraction000179614
      WBInteraction000179812
      WBInteraction000181580
      WBInteraction000182327
      WBInteraction000183702
      WBInteraction000184623
      WBInteraction000186690
      WBInteraction000190078
      WBInteraction000190085
      WBInteraction000192771
      WBInteraction000193262
      WBInteraction000195846
      WBInteraction000200883
      WBInteraction000205560
      WBInteraction000206023
      WBInteraction000208884
      WBInteraction000212227
      WBInteraction000216093
      WBInteraction000218725
      WBInteraction000218732
      WBInteraction000220326
      WBInteraction000221284
      WBInteraction000221802
      WBInteraction000222491
      WBInteraction000227488
      WBInteraction000227694
      WBInteraction000227924
      WBInteraction000235379
      WBInteraction000237444
      WBInteraction000239336
      WBInteraction000241508
      WBInteraction000242479
      WBInteraction000242665
      WBInteraction000244952
      WBInteraction000245843
      WBInteraction000247235
      WBInteraction000250343
      WBInteraction000251741
      WBInteraction000257433
      WBInteraction000258418
      WBInteraction000259090
      WBInteraction000263230
      WBInteraction000267392
      WBInteraction000271796
      WBInteraction000272131
      WBInteraction000273073
      WBInteraction000273214
      WBInteraction000276848
      WBInteraction000278554
      WBInteraction000279765
      WBInteraction000281084
      WBInteraction000283786
      WBInteraction000284282
      WBInteraction000285045
      WBInteraction000285753
      WBInteraction000285794
      WBInteraction000286445
      WBInteraction000287886
      WBInteraction000288058
      WBInteraction000298286
      WBInteraction000298868
      WBInteraction000300491
      WBInteraction000304549
      WBInteraction000308523
      WBInteraction000313937
      WBInteraction000316310
      WBInteraction000318118
      WBInteraction000327042
      WBInteraction000332669
      WBInteraction000334609
      WBInteraction000336853
      WBInteraction000338973
      WBInteraction000349578
      WBInteraction000351752
      WBInteraction000361065
      WBInteraction000361375
      WBInteraction000362361
      WBInteraction000375560
      WBInteraction000382938
      WBInteraction000408621
      WBInteraction000412363
      WBInteraction000414898
      WBInteraction000415948
      WBInteraction000419669
      WBInteraction000425553
      WBInteraction000429090
      WBInteraction000429406
      WBInteraction000432448
      WBInteraction000441526
      WBInteraction000451090
      WBInteraction000456187
      WBInteraction000457949
      WBInteraction000459338
      WBInteraction000464127
      WBInteraction000465889
      WBInteraction000465997
      WBInteraction000465998
      WBInteraction000465999
      WBInteraction000471415
      WBInteraction000474982
      WBInteraction000548795
      WBInteraction000571016
      WBInteraction000582285
  Map_info: Map: III Position: 20.7087 Error: 0.003802
    Positive: Positive_clone: ZK1010 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025192
    WBPaper00027067
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene