WormBase Tree Display for Gene: WBGene00000730

WBGene00000730 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: T11F9
  Identity: Version: 1
    Name: CGC_name: col-157 Person_evidence: WBPerson345
      Sequence_name: T11F9.9
      Molecular_name: T11F9.9
        T11F9.9.1
        CE06421
      Other_name: CELE_T11F9.9 Accession_evidence: NDB BX284605
      Public_name: col-157
    DB_info: Database: AceView gene 5L963
        WormQTL gene WBGene00000730
        WormFlux gene WBGene00000730
        NDB locus_tag CELE_T11F9.9
        Panther gene CAEEL|WormBase=WBGene00000730|UniProtKB=Q22393
          family PTHR24637
        NCBI gene 188426
        RefSeq protein NM_073512.3
        TrEMBL UniProtAcc Q22393
        UniProt_GCRP UniProtAcc Q22393
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (27)
    Strain: WBStrain00049369
    RNASeq_FPKM (74)
    GO_annotation: 00075144
      00075145
      00075146
      00107718
    Ortholog (56)
    Paralog (163)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T11F9.9
    Corresponding_transcript: T11F9.9.1
    Other_sequence (185)
    Associated_feature: WBsf647265
      WBsf1001364
      WBsf1020457
      WBsf232509
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr1012530
      Expr1030444
      Expr1156737
      Expr2010352
      Expr2028595
    Drives_construct: WBCnstr00037328
    Construct_product: WBCnstr00037328
    Microarray_results (14)
    Expression_cluster (213)
    Interaction: WBInteraction000100333
      WBInteraction000101281
      WBInteraction000101717
      WBInteraction000102237
      WBInteraction000102245
      WBInteraction000102295
      WBInteraction000102957
      WBInteraction000102995
      WBInteraction000103153
      WBInteraction000103334
      WBInteraction000103499
      WBInteraction000103971
      WBInteraction000104688
      WBInteraction000107168
      WBInteraction000109230
      WBInteraction000109439
      WBInteraction000109674
      WBInteraction000110133
      WBInteraction000110905
      WBInteraction000111907
      WBInteraction000113464
      WBInteraction000115865
      WBInteraction000116108
      WBInteraction000116273
      WBInteraction000117933
      WBInteraction000118097
      WBInteraction000118154
      WBInteraction000118174
      WBInteraction000119595
      WBInteraction000120404
      WBInteraction000120607
      WBInteraction000120786
      WBInteraction000121704
      WBInteraction000121969
      WBInteraction000125313
      WBInteraction000125317
      WBInteraction000133131
      WBInteraction000135322
      WBInteraction000135825
      WBInteraction000137128
      WBInteraction000139307
      WBInteraction000141258
      WBInteraction000143695
      WBInteraction000163631
      WBInteraction000172715
      WBInteraction000179099
      WBInteraction000179169
      WBInteraction000186678
      WBInteraction000187958
      WBInteraction000188876
      WBInteraction000188924
      WBInteraction000189409
      WBInteraction000191706
      WBInteraction000192908
      WBInteraction000198603
      WBInteraction000205311
      WBInteraction000206461
      WBInteraction000208861
      WBInteraction000213467
      WBInteraction000220411
      WBInteraction000229896
      WBInteraction000233432
      WBInteraction000238954
      WBInteraction000239520
      WBInteraction000240317
      WBInteraction000250267
      WBInteraction000253010
      WBInteraction000253664
      WBInteraction000261174
      WBInteraction000262495
      WBInteraction000279674
      WBInteraction000279715
      WBInteraction000288770
      WBInteraction000298666
      WBInteraction000301044
      WBInteraction000307926
      WBInteraction000310995
      WBInteraction000311175
      WBInteraction000317457
      WBInteraction000320246
      WBInteraction000323335
      WBInteraction000343517
      WBInteraction000351091
      WBInteraction000353394
      WBInteraction000354393
      WBInteraction000362791
      WBInteraction000368370
      WBInteraction000371741
      WBInteraction000371868
      WBInteraction000372060
      WBInteraction000372476
      WBInteraction000376092
      WBInteraction000376489
      WBInteraction000383882
      WBInteraction000390792
      WBInteraction000390793
      WBInteraction000390794
      WBInteraction000393240
      WBInteraction000398250
      WBInteraction000401533
      WBInteraction000404961
      WBInteraction000411440
      WBInteraction000415734
      WBInteraction000416603
      WBInteraction000420471
      WBInteraction000423928
      WBInteraction000431504
      WBInteraction000444187
      WBInteraction000448370
      WBInteraction000449352
      WBInteraction000455224
      WBInteraction000461222
      WBInteraction000465629
      WBInteraction000466761
      WBInteraction000471713
      WBInteraction000472159
      WBInteraction000473754
  Map_info: Map: V Position: 3.1627 Error: 0.001368
    Positive: Positive_clone: T11F9 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene