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WormBase Tree Display for Gene: WBGene00000908

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Name Class

WBGene00000908SMapS_parentSequenceF11A1
IdentityVersion2
NameCGC_namedaf-12Person_evidenceWBPerson521
Sequence_nameF11A1.3
Molecular_name (24)
Other_namemig-7
XL285Inferred_automatically
daf-20Paper_evidenceWBPaper00000504
WBPaper00001035
WBPaper00002343
CELE_F11A1.3Accession_evidenceNDBBX284606
Public_namedaf-12
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
219 Oct 2007 09:50:03WBPerson2970Name_changeOther_namedaf-20
StatusLive
Gene_info (11)
Disease_infoPotential_model (53)
Molecular_infoCorresponding_CDSF11A1.3a
F11A1.3b
F11A1.3c
F11A1.3d
F11A1.3e
F11A1.3f
F11A1.3g
Corresponding_CDS_historyF11A1.3:wp50
Corresponding_transcriptF11A1.3a.1
F11A1.3b.1
F11A1.3c.1
F11A1.3d.1
F11A1.3e.1
F11A1.3e.2
F11A1.3e.3
F11A1.3e.4
F11A1.3f.1
F11A1.3g.1
Other_sequence (38)
Associated_feature (36)
Gene_product_binds (1608)
Transcription_factorWBTranscriptionFactor000141
Experimental_infoRNAi_result (37)
Expr_patternExpr1047
Expr1113
Expr2590
Expr3460
Expr1010206
Expr1030570
Expr1148270
Expr1200225
Expr2010762
Expr2028999
Drives_constructWBCnstr00000398
WBCnstr00010047
WBCnstr00010864
WBCnstr00037202
Construct_productWBCnstr00010047
WBCnstr00015875
WBCnstr00015876
WBCnstr00016715
WBCnstr00020500
WBCnstr00021918
WBCnstr00037202
Regulate_expr_clusterWBPaper00027339:daf-12(rh273)_downregulated
WBPaper00027339:daf-12(rh273)_upregulated
WBPaper00040221:DAF-12_target_ALF4
WBPaper00040221:DAF-12_target_ALF9
WBPaper00040412:germline-regulated_daf-12_target
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00058678:DAF-12_downregulated_PVD
WBPaper00058678:DAF-12_upregulated_PVD
Microarray_results (42)
Expression_clusterWBPaper00032976:dosage_compensated_genes
WBPaper00033070:Elbe_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037055:DAF-16_binding_DNA
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00040221:DAF-12_target_ALF4
WBPaper00042165:let-7_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:flat_dev_expression
WBPaper00045316:prg-1_upregulated_L1
WBPaper00045316:prg-1_upregulated_L2
WBPaper00045316:prg-1_upregulated_L3
WBPaper00045316:prg-1_upregulated_L4
WBPaper00045521:Spermatogenic
WBPaper00046509:htz-1(ok3099)_downregulated
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049217:DAF-16_upregulated
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050412:cco-1(RNAi)_upregulated_N2
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050903:mir-35-41(nDf50)_25C_upregulated
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00054626:NO_upregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055969:electromagnetic-field_downregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057149:prgn-1(tm985)_downregulated
WBPaper00058598:mex-1(or286)_downregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_downregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061274:hypergravity_15xg_downregulated
WBPaper00061340:M_cell
WBPaper00061341:28C_24h_upregulated
WBPaper00061405:S.aureus_downregulated_starvation
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:176662_at-Y53F4B.16
WBPaper00061527:srj-21-srh-32
WBPaper00061527:tnt-4-myo-1_2160
WBPaper00061651:PVN_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065158:AFD_enriched
WBPaper00065841:119_0
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4489_group_11
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00027111:rde-3(ne298)_upregulated
WBPaper00027342:alpha-Synuclein(A53T)_downregulated
WBPaper00029437:dcr-1_upregulated
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031832:slr-2_regulated
WBPaper00034661:AgNPs_downregulated
WBPaper00035227:heat_shock_regulated
WBPaper00035588:alg-1(-)_upregulated
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Cadmium_regulated
WBPaper00036123:Fluoranthene_regulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040876:mir-35_upregulated
WBPaper00040963:Q50_up
WBPaper00040963:Q200_up
WBPaper00040963:TA300_down
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HF_11d_2.0mM_Up
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00042548:miRISC_enriched
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045865:biofilm_downregulated_B
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_upregulated
Interaction (429)
WBProcessWBbiopr:00000001
WBbiopr:00000008
WBbiopr:00000025
WBbiopr:00000039
WBbiopr:00000083
WBbiopr:00000121
Map_infoMapXPosition2.367
Well_ordered
PositivePositive_cloneDR#182
F11A1Inferred_automaticallyFrom sequence, transcript, pseudogene data
NegativeOutside_rearrnDf19
Mapping_data2_point432
7020
7021
7022
Multi_point (34)
Pos_neg_data9397
9398
Reference (535)
Remark[200225 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (2.36378)
MethodGene