WormBase Tree Display for Gene: WBGene00001064
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WBGene00001064 | SMap | S_parent | Sequence | T14B4 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dpy | ||||||
Reference_allele | WBVar00142906 | ||||||
Allele (30) | |||||||
Legacy_information | e8 : dumpy left roller; early larvae non-dumpy. ES3 ME1. NA > 10 (e115 sc38ts sc78sd e489 (pka rol-2) etc.). | ||||||
See dpy-2. | |||||||
See also e115, e487, e489, e961, e1280, e1359 | |||||||
[C.elegansII] e8 : dumpy left roller; early larvae non-dumpy. Suppresses some alleles of glp-1, emb-5. ES3 ME1. OA>10: e115, sc38ts, sc78sd,e489 (pka rol-2), e961, q292 etc. Cloned: encodes collagen, 41% identical to adjacent gene dpy-10. [Brenner 1974; Levy et al. 1993; CH] | |||||||
Strain (15) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00044941 | ||||||
00044942 | |||||||
00044943 | |||||||
00044944 | |||||||
00044945 | |||||||
00044946 | |||||||
00044947 | |||||||
00044948 | |||||||
00108188 | |||||||
Ortholog (29) | |||||||
Paralog (162) | |||||||
Structured_description | Concise_description | The dpy-2 gene encodes an unusual cuticular collagen that is required for maintaining the normal body length of the animal in later larval stages; dpy-2 interacts with other cuticular collagens such as dpy-10 and sqt-1, and suppresses mutations in glp-1, mup-1, and emb-5. | Paper_evidence | WBPaper00001792 | |||
WBPaper00003853 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to be a structural constituent of collagen and cuticulin-based cuticle. Involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle; post-embryonic body morphogenesis; and regulation of growth. Predicted to be part of collagen trimer. Expressed in head neurons and pharynx. Used to study skin disease. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Experimental_model | DOID:37 | Homo sapiens | Paper_evidence | WBPaper00061220 | ||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 02 May 2022 00:00:00 | ||||||
Models_disease_in_annotation | WBDOannot00001173 | ||||||
Molecular_info | Corresponding_CDS | T14B4.6 | |||||
Corresponding_transcript | T14B4.6.1 | ||||||
Other_sequence (15) | |||||||
Associated_feature | WBsf644316 | ||||||
WBsf657711 | |||||||
WBsf221491 | |||||||
WBsf221492 | |||||||
Experimental_info | RNAi_result (23) | ||||||
Expr_pattern | Expr4481 | ||||||
Expr4482 | |||||||
Expr1024298 | |||||||
Expr1030673 | |||||||
Expr1156898 | |||||||
Expr2011070 | |||||||
Expr2029307 | |||||||
Drives_construct | WBCnstr00012049 | ||||||
WBCnstr00012050 | |||||||
WBCnstr00037107 | |||||||
Construct_product | WBCnstr00037107 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (271) | |||||||
Interaction (192) | |||||||
WBProcess | WBbiopr:00000124 | ||||||
Map_info | Map | II | Position | 0.042787 | Error | 0.009724 | |
Well_ordered | |||||||
Positive | Inside_rearr | arDp2 | |||||
Positive_clone | T14B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Mapping_data | 2_point | 36 | |||||
47 | |||||||
217 | |||||||
6101 | |||||||
7051 | |||||||
Multi_point (17) | |||||||
Pos_neg_data (22) | |||||||
Reference (73) | |||||||
Method | Gene |